RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 SLC25A21Q9BQT8 299 aaPredicted RBP17.15■□□□□ 0.34
VPS37C-202ENST00000535818 HINT2Q9BX68 163 aa17.15■□□□□ 0.34
VPS37C-202ENST00000535818 RANGRFQ9HD47 186 aaPredicted RBP17.15■□□□□ 0.34
VPS37C-202ENST00000535818 AKIP1Q9NQ31 210 aa17.15■□□□□ 0.34
VPS37C-202ENST00000535818 FKBP11Q9NYL4 201 aa17.15■□□□□ 0.34
VPS37C-202ENST00000535818 PRNDQ9UKY0 176 aa17.15■□□□□ 0.34
VPS37C-202ENST00000535818 GPR132Q9UNW8 380 aa17.15■□□□□ 0.34
VPS37C-202ENST00000535818 OR51B2Q9Y5P1 312 aa17.15■□□□□ 0.34
VPS37C-202ENST00000535818 PIGBOS1A0A0B4J2F0 54 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 CGB1A6NKQ9 187 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 SEC14L6B5MCN3 397 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 OVOL1O14753 267 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 OR2J3O76001 311 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 IGKV1-39P01597 117 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 IGKV1D-39P04432 117 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 TRAPPC2P0DI81 140 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 TRAPPC2BP0DI82 140 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 DEFA4P12838 97 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 HOXD3P31249 432 aaPredicted RBP17.14■□□□□ 0.33
VPS37C-202ENST00000535818 ATP5G2Q06055 141 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 EXOSC2Q13868 293 aaKnown RBP17.14■□□□□ 0.33
VPS37C-202ENST00000535818 C9orf66Q5T8R8 295 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 C19orf35Q6ZS72 473 aa17.14■□□□□ 0.33
VPS37C-202ENST00000535818 C7orf50Q9BRJ6 194 aaKnown RBP17.14■□□□□ 0.33
VPS37C-202ENST00000535818 SRSF8Q9BRL6 282 aaKnown RBP17.14■□□□□ 0.33
VPS37C-202ENST00000535818 TRBV9A0A0B4J1U6 114 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 TEX50A0A1B0GTY4 177 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 RBMXL2O75526 392 aaKnown RBP17.13■□□□□ 0.33
VPS37C-202ENST00000535818 CRYGCP07315 174 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 CTRB1P17538 263 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 AKR1C2P52895 323 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 SP6Q3SY56 376 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 CTRB2Q6GPI1 263 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 SGPP2Q8IWX5 399 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 NECAP1Q8NC96 275 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 OR4A16Q8NH70 328 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 DLX4Q92988 240 aaPredicted RBP17.13■□□□□ 0.33
VPS37C-202ENST00000535818 RTBDNQ9BSG5 229 aaPredicted RBP17.13■□□□□ 0.33
VPS37C-202ENST00000535818 KCNIP3Q9Y2W7 256 aa17.13■□□□□ 0.33
VPS37C-202ENST00000535818 IGLC7A0M8Q6 106 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 C15orf61A6NNL5 157 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 WIPF1O43516 503 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 ZP3P21754 424 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 DHODHQ02127 395 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 PDLIM3Q53GG5 364 aaPredicted RBP17.12■□□□□ 0.33
VPS37C-202ENST00000535818 ZNF343Q6P1L6 599 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 REC114Q7Z4M0 266 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 HSD17B13Q7Z5P4 300 aaPredicted RBP17.12■□□□□ 0.33
VPS37C-202ENST00000535818 C5orf66Q9H5L9 145 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 NAA60Q9H7X0 242 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 PEF1Q9UBV8 284 aaKnown RBP17.12■□□□□ 0.33
VPS37C-202ENST00000535818 FBXL7Q9UJT9 491 aa17.12■□□□□ 0.33
VPS37C-202ENST00000535818 ANXA3P12429 323 aa17.11■□□□□ 0.33
VPS37C-202ENST00000535818 HIST1H1BP16401 226 aaKnown RBP17.11■□□□□ 0.33
VPS37C-202ENST00000535818 UCP1P25874 307 aa17.11■□□□□ 0.33
VPS37C-202ENST00000535818 MECP2P51608 486 aaKnown RBP17.11■□□□□ 0.33
VPS37C-202ENST00000535818 C15orf32Q32M92 178 aa17.11■□□□□ 0.33
VPS37C-202ENST00000535818 OR10W1Q8NGF6 305 aa17.11■□□□□ 0.33
VPS37C-202ENST00000535818 OR5B3Q8NH48 314 aa17.11■□□□□ 0.33
VPS37C-202ENST00000535818 RNASE11Q8TAA1 199 aaKnown RBP17.11■□□□□ 0.33
VPS37C-202ENST00000535818 LSM10Q969L4 123 aaKnown RBP17.11■□□□□ 0.33
VPS37C-202ENST00000535818 CCDC32Q9BV29 185 aa17.11■□□□□ 0.33
VPS37C-202ENST00000535818 AURKAIP1Q9NWT8 199 aaPredicted RBP17.11■□□□□ 0.33
VPS37C-202ENST00000535818 CRYM-AS1A6NIL9 109 aa17.1■□□□□ 0.33
VPS37C-202ENST00000535818 CYB5BO43169 146 aa17.1■□□□□ 0.33
VPS37C-202ENST00000535818 OR5AC1P0C628 307 aa17.1■□□□□ 0.33
VPS37C-202ENST00000535818 IL7P13232 177 aa17.1■□□□□ 0.33
VPS37C-202ENST00000535818 RBMS2Q15434 407 aaKnown RBP17.1■□□□□ 0.33
VPS37C-202ENST00000535818 BAK1Q16611 211 aa17.1■□□□□ 0.33
VPS37C-202ENST00000535818 RRNAD1Q96FB5 475 aaKnown RBP17.1■□□□□ 0.33
VPS37C-202ENST00000535818 TMEM56Q96MV1 263 aa17.1■□□□□ 0.33
VPS37C-202ENST00000535818 NDUFA4L2Q9NRX3 87 aa17.1■□□□□ 0.33
VPS37C-202ENST00000535818 OR13C7P0DN81 318 aa17.09■□□□□ 0.33
VPS37C-202ENST00000535818 FANCD2OSQ96PS1 177 aa17.09■□□□□ 0.33
VPS37C-202ENST00000535818 WDR12Q9GZL7 423 aaKnown RBP17.09■□□□□ 0.33
VPS37C-202ENST00000535818 TMEM222Q9H0R3 208 aa17.09■□□□□ 0.33
VPS37C-202ENST00000535818 TMEM14BQ9NUH8 114 aa17.09■□□□□ 0.33
VPS37C-202ENST00000535818 ZMAT5Q9UDW3 170 aaKnown RBP17.09■□□□□ 0.33
VPS37C-202ENST00000535818 DBX1A6NMT0 343 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 IGKV1-5P01602 117 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 TRBV12-3P01733 135 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 SRPXP78539 464 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 EGFEM1PQ0D2K5 195 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 RPEL1Q2QD12 228 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 FAM209BQ5JX69 171 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 FAM219AQ8IW50 185 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 GALNT14Q96FL9 552 aa17.08■□□□□ 0.32
VPS37C-202ENST00000535818 IGLV11-55A0A075B6I3 123 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 SAP30O75446 220 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 NDUFB8O95169 186 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 INSL3P51460 131 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 KRTAP10-11P60412 298 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 WT1-ASQ06250 92 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 IZUMO4Q1ZYL8 232 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 RBPMSQ93062 196 aaKnown RBP17.07■□□□□ 0.32
VPS37C-202ENST00000535818 SDHCQ99643 169 aaPredicted RBP17.07■□□□□ 0.32
VPS37C-202ENST00000535818 THYN1Q9P016 225 aa17.07■□□□□ 0.32
VPS37C-202ENST00000535818 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.06■□□□□ 0.32
VPS37C-202ENST00000535818 AKR1C4P17516 323 aa17.06■□□□□ 0.32
VPS37C-202ENST00000535818 MRAPQ8TCY5 172 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms