RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PEF1Q9UBV8 284 aaKnown RBP11.81□□□□□ -0.52
CPSF1-210ENST00000532935 COL7A1Q02388 2944 aa11.81□□□□□ -0.52
CPSF1-210ENST00000532935 LYRM1O43325 122 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 SAP30O75446 220 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 OR2J3O76001 311 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 RAB3DO95716 219 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 KRASP01116 189 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 TRBV12-3P01733 135 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 CRYGCP07315 174 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 PSMB6P28072 239 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 G6PCP35575 357 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 ECI1P42126 302 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 EXOSC2Q13868 293 aaKnown RBP11.8□□□□□ -0.52
CPSF1-210ENST00000532935 ZNF57Q68EA5 555 aaPredicted RBP11.8□□□□□ -0.52
CPSF1-210ENST00000532935 STEAP1BQ6NZ63 245 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 ACSM6Q6P461 480 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 CADM3Q8N126 398 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 PPP1R14BQ96C90 147 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 COMMD5Q9GZQ3 224 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 COPZ2Q9P299 210 aa11.8□□□□□ -0.52
CPSF1-210ENST00000532935 A0A1B0GVG6 124 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 REG1AP05451 166 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 CTRB1P17538 263 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 PI3P19957 117 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 RND3P61587 244 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 DEFB121Q5J5C9 76 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 CTRB2Q6GPI1 263 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 ENKURQ8TC29 256 aa11.79□□□□□ -0.52
CPSF1-210ENST00000532935 ZNF486Q96H40 463 aaPredicted RBP11.79□□□□□ -0.52
CPSF1-210ENST00000532935 QTRT1Q9BXR0 403 aaKnown RBP11.79□□□□□ -0.52
CPSF1-210ENST00000532935 DHFRP00374 187 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 FAUP35544 74 aaKnown RBP11.78□□□□□ -0.52
CPSF1-210ENST00000532935 KLF9Q13886 244 aaPredicted RBP11.78□□□□□ -0.52
CPSF1-210ENST00000532935 KLF5Q13887 457 aaPredicted RBP11.78□□□□□ -0.52
CPSF1-210ENST00000532935 MEF2DQ14814 521 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 SCGB2B2Q4G0G5 96 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 NRARPQ7Z6K4 114 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 TERB2Q8NHR7 220 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 FANCD2OSQ96PS1 177 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 PRR25Q96S07 402 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
CPSF1-210ENST00000532935 ELOVL1Q9BW60 279 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 FBXL7Q9UJT9 491 aa11.78□□□□□ -0.52
CPSF1-210ENST00000532935 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
CPSF1-210ENST00000532935 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 FAM240BA0A1B0GVZ2 78 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 IGLC7A0M8Q6 106 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 ANKRD20A5PA0PJZ0 165 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 SNAPC5O75971 98 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 DEFA4P12838 97 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 HIST1H1BP16401 226 aaKnown RBP11.77□□□□□ -0.53
CPSF1-210ENST00000532935 PIGPP57054 158 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 SYNJ2BPP57105 145 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 RPEL1Q2QD12 228 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 KLK9Q2XQG4 91 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 THOC7Q6I9Y2 204 aaKnown RBP11.77□□□□□ -0.53
CPSF1-210ENST00000532935 FAAP20Q6NZ36 180 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 OR10W1Q8NGF6 305 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 OR1L8Q8NGR8 309 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 OR4C12Q96R67 309 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 KLK9Q9UKQ9 250 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 ZNF256Q9Y2P7 627 aaPredicted RBP11.77□□□□□ -0.53
CPSF1-210ENST00000532935 NSG2Q9Y328 171 aa11.77□□□□□ -0.53
CPSF1-210ENST00000532935 H0Y980 276 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 BMPR1BO00238 502 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 NDUFB8O95169 186 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 IGKV1-39P01597 117 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 IGKV1D-39P04432 117 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 SERPINE2P07093 398 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 AKAIN1P0CW23 69 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 TRAPPC2P0DI81 140 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 TRAPPC2BP0DI82 140 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 FAM209BQ5JX69 171 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 PLET1Q6UQ28 207 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 OR13C8Q8NGS7 320 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 MARCH1Q8TCQ1 289 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 MRGPRFQ96AM1 343 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 SEC22AQ96IW7 307 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 NDUFA4L2Q9NRX3 87 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 PRNDQ9UKY0 176 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 OR51B2Q9Y5P1 312 aa11.76□□□□□ -0.53
CPSF1-210ENST00000532935 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 LY86O95711 162 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 BCAP31P51572 246 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 TATDN3Q17R31 274 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 HSD17B13Q7Z5P4 300 aaPredicted RBP11.75□□□□□ -0.53
CPSF1-210ENST00000532935 CCDC71LQ8N9Z2 235 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 OR4C16Q8NGL9 310 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 OR9G4Q8NGQ1 327 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 CHAC2Q8WUX2 184 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 TP53RKQ96S44 253 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 MARVELD1Q9BSK0 173 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 HINT2Q9BX68 163 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 FKBP11Q9NYL4 201 aa11.75□□□□□ -0.53
CPSF1-210ENST00000532935 C3orf85A0A1B0GTC6 90 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms