RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CCDC71LQ8N9Z2 235 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 OR1L8Q8NGR8 309 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 DEDD2Q8WXF8 326 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 DCUN1D4Q92564 292 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 DLX4Q92988 240 aaPredicted RBP10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 QTRT1Q9BXR0 403 aaKnown RBP10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 COMMD5Q9GZQ3 224 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 TMEM222Q9H0R3 208 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 NAA60Q9H7X0 242 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 SCP2D1Q9UJQ7 156 aa10.72□□□□□ -0.69
TSPAN4-220ENST00000532375 IGLV11-55A0A075B6I3 123 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 A0A0B4J293 547 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 TEX13DA0A0J9YY54 714 aaPredicted RBP10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 C15orf61A6NNL5 157 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 LINC01619G3V211 115 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 B3GALNT1O75752 331 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 NDUFB8O95169 186 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 REG1AP05451 166 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 OR5AC1P0C628 307 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 OR8U8P0C7N1 319 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 TRAPPC2P0DI81 140 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 TRAPPC2BP0DI82 140 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 SLURP1P55000 103 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 KRTAP10-11P60412 298 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 EGFEM1PQ0D2K5 195 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 CNPY1Q3B7I2 92 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 Q6ZRM9 215 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 NECAP1Q8NC96 275 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 GALNT14Q96FL9 552 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 MCUBQ9NWR8 336 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 PRNDQ9UKY0 176 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 C14orf166Q9Y224 244 aaKnown RBP10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 OR51B2Q9Y5P1 312 aa10.71□□□□□ -0.69
TSPAN4-220ENST00000532375 C13orf42A0A1B0GVH6 325 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 FAM223BA6NKX1 122 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 SNAPC5O75971 98 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 OR2J3O76001 311 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 PRB2P02812 416 aaPredicted RBP10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 MFAP2P55001 183 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 RAB25P57735 213 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 AP3S2P59780 193 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 THOC7Q6I9Y2 204 aaKnown RBP10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 H2BFWTQ7Z2G1 175 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 FAM223AQ8IWN6 122 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 SELENOHQ8IZQ5 122 aaKnown RBP10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 OR5B3Q8NH48 314 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 DPF1Q92782 380 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 TMEM56Q96MV1 263 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 TSC22D3Q99576 134 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 MCRIP2Q9BUT9 160 aaKnown RBP10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 RANGRFQ9HD47 186 aaPredicted RBP10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 TMEM56-RWDD3S4R434 201 aa10.7□□□□□ -0.7
TSPAN4-220ENST00000532375 HSPE1P61604 102 aaKnown RBP10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 DHODHQ02127 395 aa10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 ATP5G2Q06055 141 aa10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 TMEM187Q14656 261 aa10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 AARDQ4LEZ3 155 aa10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 LINC00299Q6ZSB3 139 aa10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 ZNF429Q86V71 674 aa10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 FKBP11Q9NYL4 201 aa10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 PEF1Q9UBV8 284 aaKnown RBP10.69□□□□□ -0.7
TSPAN4-220ENST00000532375 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 ANKRD34BA5PLL1 514 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 OR13C7P0DN81 318 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 IL7P13232 177 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 HOXD3P31249 432 aaPredicted RBP10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 BTCP35070 178 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 FAUP35544 74 aaKnown RBP10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 KLF5Q13887 457 aaPredicted RBP10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 HSD17B13Q7Z5P4 300 aaPredicted RBP10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 SCGB3A2Q96PL1 93 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 PRR13Q9NZ81 148 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 FBXL7Q9UJT9 491 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 SORL1Q92673 2214 aa10.68□□□□□ -0.7
TSPAN4-220ENST00000532375 SEC14L6B5MCN3 397 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 BMPR1BO00238 502 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 OVOL1O14753 267 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 PLA2G10O15496 165 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 PRCDQ00LT1 54 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 EXOSC2Q13868 293 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 TRIM16LQ309B1 348 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 PDLIM3Q53GG5 364 aaPredicted RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 ZNF57Q68EA5 555 aaPredicted RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 ACSM6Q6P461 480 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 IL34Q6ZMJ4 242 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 SGPP2Q8IWX5 399 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 OR4A16Q8NH70 328 aa10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 RBPMSQ93062 196 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 SLC25A21Q9BQT8 299 aaPredicted RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 AURKAIP1Q9NWT8 199 aaPredicted RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 F11RQ9Y624 299 aaKnown RBP10.67□□□□□ -0.7
TSPAN4-220ENST00000532375 MFSD2BA6NFX1 497 aa10.66□□□□□ -0.7
TSPAN4-220ENST00000532375 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
TSPAN4-220ENST00000532375 ST8SIA3O43173 380 aa10.66□□□□□ -0.7
TSPAN4-220ENST00000532375 HIST1H1BP16401 226 aaKnown RBP10.66□□□□□ -0.7
TSPAN4-220ENST00000532375 AKR1C4P17516 323 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms