RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	DMRT1	Q9Y5R6	373 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370		S4R3C0	116 aa		13.36	□□□□□ -0.27
CTSB-223	ENST00000532370	DISC1	C4P0D8	188 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370		H0Y980	276 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	SAP30	O75446	220 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	SNAPC5	O75971	98 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	IGHV3-23	P01764	117 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	FGF2	P09038	288 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	TRAPPC2	P0DI81	140 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	TRAPPC2B	P0DI82	140 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	ZP3	P21754	424 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	ETV6	P41212	452 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	ECI1	P42126	302 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	WT1-AS	Q06250	92 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	KLF5	Q13887	457 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	IZUMO4	Q1ZYL8	232 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	ACSM6	Q6P461	480 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	CADM3	Q8N126	398 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	OR1L8	Q8NGR8	309 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	HINT2	Q9BX68	163 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	NDUFA4L2	Q9NRX3	87 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	COPZ2	Q9P299	210 aa		13.35	□□□□□ -0.27
CTSB-223	ENST00000532370	C3orf85	A0A1B0GTC6	90 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	CTSD	P07339	412 aa	Predicted RBP	13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	OR13C7	P0DN81	318 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	DEFA4	P12838	97 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	SYNJ2BP	P57105	145 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	ZNF79	Q15937	498 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	LINC00299	Q6ZSB3	139 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	PRR25	Q96S07	402 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	C5orf66	Q9H5L9	145 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	TMEM14B	Q9NUH8	114 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	PRND	Q9UKY0	176 aa		13.34	□□□□□ -0.27
CTSB-223	ENST00000532370	IGLV11-55	A0A075B6I3	123 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	BMPR1B	O00238	502 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	IGKV1-5	P01602	117 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	KLK9	Q2XQG4	91 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	DEFB121	Q5J5C9	76 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	H2BFWT	Q7Z2G1	175 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	HAPLN4	Q86UW8	402 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	ZNF429	Q86V71	674 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370		Q8N402	240 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	TRIM63	Q969Q1	353 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	PRRT1	Q99946	306 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	SRSF8	Q9BRL6	282 aa	Known RBP	13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	MCUB	Q9NWR8	336 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	PTTG2	Q9NZH5	202 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	KLK9	Q9UKQ9	250 aa		13.33	□□□□□ -0.28
CTSB-223	ENST00000532370	C15orf61	A6NNL5	157 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	PPP5D1	E7EU14	171 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	DHFR	P00374	187 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	HLA-A	P01891	365 aa	Known RBP	13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	INSL3	P51460	131 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	KLF9	Q13886	244 aa	Predicted RBP	13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	RPEL1	Q2QD12	228 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	IL34	Q6ZMJ4	242 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	CCDC71L	Q8N9Z2	235 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	OR4A16	Q8NH70	328 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	CCDC140	Q96MF4	163 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	TSC22D3	Q99576	134 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	GPR132	Q9UNW8	380 aa		13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	C14orf166	Q9Y224	244 aa	Known RBP	13.32	□□□□□ -0.28
CTSB-223	ENST00000532370	MFSD2B	A6NFX1	497 aa		13.31	□□□□□ -0.28
CTSB-223	ENST00000532370	MFAP2	P55001	183 aa		13.31	□□□□□ -0.28
CTSB-223	ENST00000532370	SURF2	Q15527	256 aa	Predicted RBP	13.31	□□□□□ -0.28
CTSB-223	ENST00000532370	TRIM16L	Q309B1	348 aa		13.31	□□□□□ -0.28
CTSB-223	ENST00000532370	GDPD1	Q8N9F7	314 aa		13.31	□□□□□ -0.28
CTSB-223	ENST00000532370	OR5B3	Q8NH48	314 aa		13.31	□□□□□ -0.28
CTSB-223	ENST00000532370	SLC2A8	Q9NY64	477 aa		13.31	□□□□□ -0.28
CTSB-223	ENST00000532370		A0A0B4J293	547 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	OR5AC1	P0C628	307 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370		P0C879	139 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	HIST1H1B	P16401	226 aa	Known RBP	13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	UCP1	P25874	307 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	SPANXN2	Q5MJ10	180 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	CLEC19A	Q6UXS0	136 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	OR9G4	Q8NGQ1	327 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	LSM10	Q969L4	123 aa	Known RBP	13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	OR4C12	Q96R67	309 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	NAA60	Q9H7X0	242 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	FKBP11	Q9NYL4	201 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	ZMAT5	Q9UDW3	170 aa	Known RBP	13.3	□□□□□ -0.28
CTSB-223	ENST00000532370	SCP2D1	Q9UJQ7	156 aa		13.3	□□□□□ -0.28
CTSB-223	ENST00000532370		A0A0G2JRQ6	117 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	OR2C1	O95371	312 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	SPN	P16150	400 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	AKR1C2	P52895	323 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	SPINK9	Q5DT21	86 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	THOC7	Q6I9Y2	204 aa	Known RBP	13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	SLC25A24	Q6NUK1	477 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	LHFPL5	Q8TAF8	219 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	GLYATL2	Q8WU03	294 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	TMEM230	Q96A57	120 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	EEF1AKMT3	Q96AZ1	226 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	ELOVL1	Q9BW60	279 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	TMEM222	Q9H0R3	208 aa		13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	ZC4H2	Q9NQZ6	224 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms