RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 OR8U8P0C7N1 319 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 TRAPPC2P0DI81 140 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 TRAPPC2BP0DI82 140 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 CD33P20138 364 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 INPP1P49441 399 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 ZNF616Q08AN1 781 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 RBMS2Q15434 407 aaKnown RBP13.36□□□□□ -0.27
LMX1B-203ENST00000526117 AARDQ4LEZ3 155 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 KPRPQ5T749 579 aaPredicted RBP13.36□□□□□ -0.27
LMX1B-203ENST00000526117 SAMD5Q5TGI4 173 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 NECAP1Q8NC96 275 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 CASTOR1Q8WTX7 329 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 RBPMSQ93062 196 aaKnown RBP13.36□□□□□ -0.27
LMX1B-203ENST00000526117 MS4A10Q96PG2 267 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 FYTTD1Q96QD9 318 aaKnown RBP13.36□□□□□ -0.27
LMX1B-203ENST00000526117 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
LMX1B-203ENST00000526117 C13orf42A0A1B0GVH6 325 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 APELAP0DMC3 54 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 MYOD1P15172 320 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 AREGP15514 252 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 HIST1H1BP16401 226 aaKnown RBP13.35□□□□□ -0.27
LMX1B-203ENST00000526117 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 DEFB136Q30KP8 78 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 SP6Q3SY56 376 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 TMEM128Q5BJH2 165 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 ZNF343Q6P1L6 599 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 OR11H1Q8NG94 326 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 OR1N2Q8NGR9 330 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 LSM10Q969L4 123 aaKnown RBP13.35□□□□□ -0.27
LMX1B-203ENST00000526117 MCRIP2Q9BUT9 160 aaKnown RBP13.35□□□□□ -0.27
LMX1B-203ENST00000526117 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 OR51B2Q9Y5P1 312 aa13.35□□□□□ -0.27
LMX1B-203ENST00000526117 CENPXA8MT69 81 aa13.34□□□□□ -0.27
LMX1B-203ENST00000526117 WIPF1O43516 503 aa13.34□□□□□ -0.27
LMX1B-203ENST00000526117 AKR1C2P52895 323 aa13.34□□□□□ -0.27
LMX1B-203ENST00000526117 UBE2MP61081 183 aaKnown RBP13.34□□□□□ -0.27
LMX1B-203ENST00000526117 SUPT4H1P63272 117 aaKnown RBP13.34□□□□□ -0.27
LMX1B-203ENST00000526117 SRPXP78539 464 aa13.34□□□□□ -0.27
LMX1B-203ENST00000526117 OR4A16Q8NH70 328 aa13.34□□□□□ -0.27
LMX1B-203ENST00000526117 FANCD2OSQ96PS1 177 aa13.34□□□□□ -0.27
LMX1B-203ENST00000526117 IGLV11-55A0A075B6I3 123 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 INS-IGF2F8WCM5 200 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 LINC01619G3V211 115 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 NDUFB6O95139 128 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 HSPB1P04792 205 aaKnown RBP13.33□□□□□ -0.28
LMX1B-203ENST00000526117 ANXA3P12429 323 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 HSPE1P61604 102 aaKnown RBP13.33□□□□□ -0.28
LMX1B-203ENST00000526117 RHOGP84095 191 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 PRCDQ00LT1 54 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 TMEM187Q14656 261 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 LHFPL5Q8TAF8 219 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 RRNAD1Q96FB5 475 aaKnown RBP13.33□□□□□ -0.28
LMX1B-203ENST00000526117 RANGRFQ9HD47 186 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-203ENST00000526117 CACFD1Q9UGQ2 172 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 NSG2Q9Y328 171 aa13.33□□□□□ -0.28
LMX1B-203ENST00000526117 A0A0B4J293 547 aa13.32□□□□□ -0.28
LMX1B-203ENST00000526117 DBX1A6NMT0 343 aa13.32□□□□□ -0.28
LMX1B-203ENST00000526117 CYB5BO43169 146 aa13.32□□□□□ -0.28
LMX1B-203ENST00000526117 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
LMX1B-203ENST00000526117 BTCP35070 178 aa13.32□□□□□ -0.28
LMX1B-203ENST00000526117 WT1-ASQ06250 92 aa13.32□□□□□ -0.28
LMX1B-203ENST00000526117 PDLIM3Q53GG5 364 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-203ENST00000526117 SELENOHQ8IZQ5 122 aaKnown RBP13.32□□□□□ -0.28
LMX1B-203ENST00000526117 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
LMX1B-203ENST00000526117 DUX3Q96PT4 197 aa13.32□□□□□ -0.28
LMX1B-203ENST00000526117 WDR12Q9GZL7 423 aaKnown RBP13.32□□□□□ -0.28
LMX1B-203ENST00000526117 DUXBA0A1W2PPF3 345 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 AKR1C4P17516 323 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 ATP5G2Q06055 141 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 BEAN1Q3B7T3 259 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 CENPSQ8N2Z9 138 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 LRTM2Q8N967 370 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 ZNF114Q8NC26 417 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 OR10W1Q8NGF6 305 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 DPF1Q92782 380 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 OR5B12Q96R08 314 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 ALX4Q9H161 411 aaPredicted RBP13.31□□□□□ -0.28
LMX1B-203ENST00000526117 THYN1Q9P016 225 aa13.31□□□□□ -0.28
LMX1B-203ENST00000526117 IGHV4OR15-8A0A075B7B6 117 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 A0A087WW49 117 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 A0A0B4J2A0 478 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 A0A0G2JRQ6 117 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 G3V4G9 280 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 PLA2G10O15496 165 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 IGHV3-11P01762 117 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 PRH1P02810 166 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 OR13C7P0DN81 318 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 DEFA4P12838 97 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 ZP3P21754 424 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 CCR6P51684 374 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 C15orf32Q32M92 178 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 TMEM268Q5VZI3 342 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 LGI3Q8N145 548 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 OR52E5Q8NH55 327 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 ATP6V0BQ99437 205 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 PEF1Q9UBV8 284 aaKnown RBP13.3□□□□□ -0.28
LMX1B-203ENST00000526117 SHPKQ9UHJ6 478 aa13.3□□□□□ -0.28
LMX1B-203ENST00000526117 F11RQ9Y624 299 aaKnown RBP13.3□□□□□ -0.28
LMX1B-203ENST00000526117 NOTCH1P46531 2555 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms