RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TRAV14DV4A0A0A6YYC5 116 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 GRIFINA4D1Z8 144 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 ASPHD2Q6ICH7 369 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 ZNF430Q9H8G1 570 aaPredicted RBP13.66□□□□□ -0.22
USP42-207ENST00000521713 SDF2L1Q9HCN8 221 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 TMEM170AQ8WVE7 144 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 LEAP2Q969E1 77 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 NYNRINQ9P2P1 1898 aaKnown RBP13.66□□□□□ -0.22
USP42-207ENST00000521713 SMAD7O15105 426 aaKnown RBP13.66□□□□□ -0.22
USP42-207ENST00000521713 EBLN2Q6P2I7 272 aa13.66□□□□□ -0.22
USP42-207ENST00000521713 RCC1LQ96I51 464 aaKnown RBP13.66□□□□□ -0.22
USP42-207ENST00000521713 NPIPB11E5RHQ5 1161 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 CELA3BP08861 270 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 BTCP35070 178 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 SPANXN1Q5VSR9 72 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
USP42-207ENST00000521713 SOX21Q9Y651 276 aaPredicted RBP13.65□□□□□ -0.22
USP42-207ENST00000521713 TMEM8BA6NDV4 472 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 ARL14EPLP0DKL9 152 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 GLRX5Q86SX6 157 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 C1QL4Q86Z23 238 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 LAMTOR2Q9Y2Q5 125 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 DRAM1Q8N682 238 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 FAM216BQ8N7L0 139 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 COPS9Q8WXC6 57 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 NEUROG1Q92886 237 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
USP42-207ENST00000521713 LOC389332A0A1B0GUA5 103 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 MSGN1A6NI15 193 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 LYPD3O95274 346 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 FAM216AQ8WUB2 273 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 WBP1Q96G27 269 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 HSPB7Q9UBY9 170 aa13.65□□□□□ -0.22
USP42-207ENST00000521713 C12orf77C9JDV5 145 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 OSR1Q8TAX0 266 aaPredicted RBP13.64□□□□□ -0.23
USP42-207ENST00000521713 PRDM13Q9H4Q3 707 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 PLSCR4Q9NRQ2 329 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 RND2P52198 227 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 HBBP68871 147 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 MIC13Q5XKP0 118 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 CENPVQ7Z7K6 275 aaPredicted RBP13.64□□□□□ -0.23
USP42-207ENST00000521713 TCF19Q9Y242 345 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 COL6A6A6NMZ7 2263 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 MGAMO43451 1857 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 IL4P05112 153 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 ATP5G2Q06055 141 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 FXYD3Q14802 87 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 ZNF502Q8TBZ5 544 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 TBL2Q9Y4P3 447 aaKnown RBP13.64□□□□□ -0.23
USP42-207ENST00000521713 Q6ZS92 163 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 MDS2Q8NDY4 140 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 KCNS1Q96KK3 526 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 DCTN5Q9BTE1 182 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 LINC00312Q9Y6C7 94 aa13.64□□□□□ -0.23
USP42-207ENST00000521713 RALGAPA1Q6GYQ0 2036 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 KBTBD11-OT1A0A1B0GTJ5 212 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 TGFAP01135 160 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 RAB9AP51151 201 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 ZNF841Q6ZN19 808 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 IZUMO4Q1ZYL8 232 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 MRPL52Q86TS9 123 aaKnown RBP13.63□□□□□ -0.23
USP42-207ENST00000521713 CLDND2Q8NHS1 167 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 VWA8A3KMH1 1905 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 PI4KAP42356 2102 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 CBLN1P23435 193 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 TMEM177Q53S58 311 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 C1QL2Q7Z5L3 287 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 C7orf69Q9H7B7 122 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 BIVMQ86UB2 503 aa13.63□□□□□ -0.23
USP42-207ENST00000521713 DOCK4Q8N1I0 1966 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 ZNF146Q15072 292 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 SAMD13Q5VXD3 122 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 GGNQ86UU5 652 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 ANK1P16157 1881 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 SPTBN1Q01082 2364 aaKnown RBP13.62□□□□□ -0.23
USP42-207ENST00000521713 HTN1P15515 57 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 CDKN1AP38936 164 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 ZNF818PQ6ZRF7 136 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 PGPA6NDG6 321 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 GCHFRP30047 84 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 ZNF418Q8TF45 676 aaPredicted RBP13.62□□□□□ -0.23
USP42-207ENST00000521713 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 TMEM242Q9NWH2 141 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 NBASA2RRP1 2371 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 HAX1O00165 279 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 Q0VFX4 171 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 FAM201AQ5SY85 155 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 C16orf92Q96LL3 132 aa13.62□□□□□ -0.23
USP42-207ENST00000521713 IGHV3OR16-10A0A075B7F0 116 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 MGPP08493 103 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 LINC00614P0C842 121 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 MPZP25189 248 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 CRYBB3P26998 211 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 EEF1AKMT3Q96AZ1 226 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 ZSWIM8A7E2V4 1837 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 ZG16O60844 167 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms