RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 S100A12P80511 92 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 ERHP84090 104 aaKnown RBP2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 RELAQ04206 551 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPL18Q07020 188 aaKnown RBP2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 ZNF705AQ6ZN79 300 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 AKAP14Q86UN6 197 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 OR51T1Q8NGJ9 327 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 TSPAN32Q96QS1 320 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 NIPSNAP1Q9BPW8 284 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 CMSS1Q9BQ75 279 aaKnown RBP2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 TMEM106BQ9NUM4 274 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 DOK5Q9P104 306 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 SIPA1L1O43166 1804 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 SLX4Q8IY92 1834 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 ZNF532Q9HCE3 1301 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 ROCK1Q13464 1354 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 KDM5BQ9UGL1 1544 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 DCAF1Q9Y4B6 1507 aa2.32□□□□□ -2.04
HMGB1P46-201ENST00000520062 COL4A2P08572 1712 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 NYNRINQ9P2P1 1898 aaKnown RBP2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 IGLV3-9A0A075B6K5 115 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 TRAV26-2A0A0B4J265 109 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 IRGMA1A4Y4 181 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 H3BT86 120 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 CNIH1O95406 144 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 P0DMU3 169 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 FAM231AP0DMU4 169 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 FAM231CP0DMU5 169 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 IDO1P14902 403 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 HSD11B1P28845 292 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 HES1Q14469 280 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 CDK10Q15131 360 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 KCNJ8Q15842 424 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 MOGQ16653 247 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 IBA57Q5T440 356 aaKnown RBP2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 FAM173BQ6P4H8 233 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 KRTAP13-1Q8IUC0 172 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPP25LQ8N5L8 163 aaKnown RBP2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 ANKRD29Q8N6D5 301 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 OR8B12Q8NGG6 310 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 ACOT12Q8WYK0 555 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 OR8D2Q9GZM6 311 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 C20orf27Q9GZN8 174 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 C8orf4Q9NR00 106 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 FBXL12Q9NXK8 326 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 PRELID3BQ9Y3B1 194 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 SAMHD1Q9Y3Z3 626 aaKnown RBP2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 TMEM56-RWDD3S4R434 201 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 ADGRL3Q9HAR2 1447 aa2.31□□□□□ -2.04
HMGB1P46-201ENST00000520062 TMSB15BA0A087X1C1 80 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 TRAV38-1A0A0B4J264 116 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 IGHV1-18A0A0C4DH31 117 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 H7C2G1 150 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 SULT1A3P0DMM9 295 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 SULT1A4P0DMN0 295 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST1H2BOP23527 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HLA-DMBP28068 263 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST1H2BBP33778 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST1H2BDP58876 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST1H2BCP62807 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 GLO1Q04760 184 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 SPCS2Q15005 226 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST2H2BEQ16778 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 ZNF791Q3KP31 576 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 OR6V1Q8N148 313 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 OR13C4Q8NGS5 318 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 TEX47Q8TBZ9 253 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST1H2BHQ93079 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST1H2BNQ99877 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 HIST1H2BMQ99879 126 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 CHST6Q9GZX3 395 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 NAT8Q9UHE5 227 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 TIMM22Q9Y584 194 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 RTEL1-TNFRSF6BF6WH68 1400 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 SMARCA2P51531 1590 aa2.3□□□□□ -2.04
HMGB1P46-201ENST00000520062 FHAD1B1AJZ9 1412 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 RFPL4AA6NLU0 287 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 FABP5P3A8MUU1 101 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 RFPL4AL1F8VTS6 287 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 J3QQQ9 107 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 IGHV3-7P01780 117 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 PPP1R2P41236 205 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPL26P61254 145 aaKnown RBP2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 HBA1P69905 142 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 TMED2Q15363 201 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 ALX1Q15699 326 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 TPRXLQ17RH7 258 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 C9orf64Q5T6V5 341 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 PPP1R2P3Q6NXS1 205 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPL22L1Q6P5R6 122 aaKnown RBP2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 ZNF676Q8N7Q3 588 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 DOHHQ9BU89 302 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPL26L1Q9UNX3 145 aaKnown RBP2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 ARL2BPQ9Y2Y0 163 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 V9GYQ6 96 aa2.29□□□□□ -2.04
HMGB1P46-201ENST00000520062 VIRMAQ69YN4 1812 aaKnown RBP2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 FAM236DA0A1B0GTK5 79 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms