RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 KCNIP3Q9Y2W7 256 aa9.21□□□□□ -0.94
HPS4-218ENST00000519774 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 PLA2G10O15496 165 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 LYRM1O43325 122 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 NDUFB6O95139 128 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 CDS2O95674 445 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 TRAPPC2P0DI81 140 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 TRAPPC2BP0DI82 140 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 VAMP1P23763 118 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 SLC6A1P30531 599 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 BTCP35070 178 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 MECP2P51608 486 aaKnown RBP9.2□□□□□ -0.94
HPS4-218ENST00000519774 RAB25P57735 213 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 SUPT4H1P63272 117 aaKnown RBP9.2□□□□□ -0.94
HPS4-218ENST00000519774 KIAA0141Q14154 515 aaPredicted RBP9.2□□□□□ -0.94
HPS4-218ENST00000519774 TMEM187Q14656 261 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 SLC25A42Q86VD7 318 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 TTC9CQ8N5M4 171 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 OR10W1Q8NGF6 305 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 RBPMSQ93062 196 aaKnown RBP9.2□□□□□ -0.94
HPS4-218ENST00000519774 GALNT14Q96FL9 552 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 RAX2Q96IS3 184 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 ALX4Q9H161 411 aaPredicted RBP9.2□□□□□ -0.94
HPS4-218ENST00000519774 FKBP11Q9NYL4 201 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 ZNF257Q9Y2Q1 563 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 VWFP04275 2813 aa9.2□□□□□ -0.94
HPS4-218ENST00000519774 A0A0G2JRQ6 117 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 C13orf42A0A1B0GVH6 325 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 IGLC7A0M8Q6 106 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 NPIPB5A8MRT5 1133 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 CCL24O00175 119 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 FGF2P09038 288 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
HPS4-218ENST00000519774 ANXA3P12429 323 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 CD33P20138 364 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 PSMB6P28072 239 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 MYCNOSP40205 109 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 RHOGP84095 191 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 TMEM128Q5BJH2 165 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
HPS4-218ENST00000519774 CADM3Q8N126 398 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 OR5B3Q8NH48 314 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 FLVCR2Q9UPI3 526 aa9.19□□□□□ -0.94
HPS4-218ENST00000519774 A0A0G2JLM5 398 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 I3L521 148 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 OR2J3O76001 311 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 DHFRP00374 187 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 P0C879 139 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 OR13C7P0DN81 318 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 DEFA4P12838 97 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 SRPXP78539 464 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 PPP1R1AQ13522 171 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 SPINK9Q5DT21 86 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 THOC7Q6I9Y2 204 aaKnown RBP9.18□□□□□ -0.94
HPS4-218ENST00000519774 FAM219AQ8IW50 185 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
HPS4-218ENST00000519774 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 OR11H1Q8NG94 326 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 IL22RA2Q969J5 263 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
HPS4-218ENST00000519774 TMEM56Q96MV1 263 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 NDUFA4L2Q9NRX3 87 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 TMEM56-RWDD3S4R434 201 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 PKD1L1Q8TDX9 2849 aa9.18□□□□□ -0.94
HPS4-218ENST00000519774 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 A0A087WW49 117 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 A0A0B4J293 547 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 ANKRD34BA5PLL1 514 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 FAM223BA6NKX1 122 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 UPK1BO75841 260 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 BRI3O95415 125 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 CTRB1P17538 263 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 RUNX1Q01196 453 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 WT1-ASQ06250 92 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 EXOSC2Q13868 293 aaKnown RBP9.17□□□□□ -0.94
HPS4-218ENST00000519774 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 LGI3Q8N145 548 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 LINC00482Q8N8I6 264 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 OR1N2Q8NGR9 330 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 DPF1Q92782 380 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 P2RX4Q99571 388 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 SRSF8Q9BRL6 282 aaKnown RBP9.17□□□□□ -0.94
HPS4-218ENST00000519774 C20orf85Q9H1P6 137 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 CACNG5Q9UF02 275 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 TBC1D24Q9ULP9 559 aa9.17□□□□□ -0.94
HPS4-218ENST00000519774 TRBV9A0A0B4J1U6 114 aa9.16□□□□□ -0.94
HPS4-218ENST00000519774 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
HPS4-218ENST00000519774 SFT2D2O95562 160 aa9.16□□□□□ -0.94
HPS4-218ENST00000519774 IFNA17P01571 189 aa9.16□□□□□ -0.94
HPS4-218ENST00000519774 HLA-AP01891 365 aaKnown RBP9.16□□□□□ -0.94
HPS4-218ENST00000519774 CRYGCP07315 174 aa9.16□□□□□ -0.94
HPS4-218ENST00000519774 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms