RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DBX1A6NMT0 343 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 ATG12O94817 140 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 CRYGCP07315 174 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 IL7P13232 177 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 AKR1C2P52895 323 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 RHOGP84095 191 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 DHODHQ02127 395 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 ZNF616Q08AN1 781 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 USMG5Q96IX5 58 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 KCNIP3Q9Y2W7 256 aa10.79□□□□□ -0.68
USP46-209ENST00000514536 IGHV4OR15-8A0A075B7B6 117 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 A0A087WW49 117 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 TRBV9A0A0B4J1U6 114 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 ANKRD34BA5PLL1 514 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 NAP1L6A6NFF2 107 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 C15orf61A6NNL5 157 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 OR2J3O76001 311 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 CDS2O95674 445 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 CTRB1P17538 263 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 CCR6P51684 374 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 FHL3Q13643 280 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 CTRB2Q6GPI1 263 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 LINC00299Q6ZSB3 139 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 TMED4Q7Z7H5 227 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 SELENOHQ8IZQ5 122 aaKnown RBP10.78□□□□□ -0.68
USP46-209ENST00000514536 LHFPL5Q8TAF8 219 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 SLC25A21Q9BQT8 299 aaPredicted RBP10.78□□□□□ -0.68
USP46-209ENST00000514536 NDUFA4L2Q9NRX3 87 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 TMEM14BQ9NUH8 114 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 PTTG2Q9NZH5 202 aa10.78□□□□□ -0.68
USP46-209ENST00000514536 LINC01619G3V211 115 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 HSPB1P04792 205 aaKnown RBP10.77□□□□□ -0.68
USP46-209ENST00000514536 P0C879 139 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 OR13C7P0DN81 318 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 DEFA4P12838 97 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 ATP5G2Q06055 141 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 TMEM187Q14656 261 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 OR5B3Q8NH48 314 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 RNASE11Q8TAA1 199 aaKnown RBP10.77□□□□□ -0.68
USP46-209ENST00000514536 RRNAD1Q96FB5 475 aaKnown RBP10.77□□□□□ -0.68
USP46-209ENST00000514536 GALNT14Q96FL9 552 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 RCC1LQ96I51 464 aaKnown RBP10.77□□□□□ -0.68
USP46-209ENST00000514536 FANCD2OSQ96PS1 177 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 SRSF8Q9BRL6 282 aaKnown RBP10.77□□□□□ -0.68
USP46-209ENST00000514536 PRR13Q9NZ81 148 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 FBXL7Q9UJT9 491 aa10.77□□□□□ -0.68
USP46-209ENST00000514536 A0A0B4J293 547 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 A0A0G2JRQ6 117 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 FAM223BA6NKX1 122 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 CENPXA8MT69 81 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 NDUFB8O95169 186 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 DHFRP00374 187 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 OR8U8P0C7N1 319 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.69
USP46-209ENST00000514536 WT1-ASQ06250 92 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 TMEM268Q5VZI3 342 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 THOC7Q6I9Y2 204 aaKnown RBP10.77□□□□□ -0.69
USP46-209ENST00000514536 FAM223AQ8IWN6 122 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 NECAP1Q8NC96 275 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 S100ZQ8WXG8 99 aa10.77□□□□□ -0.69
USP46-209ENST00000514536 RBPMSQ93062 196 aaKnown RBP10.77□□□□□ -0.69
USP46-209ENST00000514536 LSM10Q969L4 123 aaKnown RBP10.77□□□□□ -0.69
USP46-209ENST00000514536 NOTCH3Q9UM47 2321 aa10.76□□□□□ -0.69
USP46-209ENST00000514536 MECP2P51608 486 aaKnown RBP10.76□□□□□ -0.69
USP46-209ENST00000514536 SLURP1P55000 103 aa10.76□□□□□ -0.69
USP46-209ENST00000514536 HSPE1P61604 102 aaKnown RBP10.76□□□□□ -0.69
USP46-209ENST00000514536 RBMS2Q15434 407 aaKnown RBP10.76□□□□□ -0.69
USP46-209ENST00000514536 C15orf32Q32M92 178 aa10.76□□□□□ -0.69
USP46-209ENST00000514536 ZNF343Q6P1L6 599 aa10.76□□□□□ -0.69
USP46-209ENST00000514536 HSD17B13Q7Z5P4 300 aaPredicted RBP10.76□□□□□ -0.69
USP46-209ENST00000514536 DCUN1D4Q92564 292 aa10.76□□□□□ -0.69
USP46-209ENST00000514536 TMEM56Q96MV1 263 aa10.76□□□□□ -0.69
USP46-209ENST00000514536 C7orf50Q9BRJ6 194 aaKnown RBP10.76□□□□□ -0.69
USP46-209ENST00000514536 RANGRFQ9HD47 186 aaPredicted RBP10.76□□□□□ -0.69
USP46-209ENST00000514536 TMEM56-RWDD3S4R434 201 aa10.76□□□□□ -0.69
USP46-209ENST00000514536 CMYA5Q8N3K9 4069 aa10.75□□□□□ -0.69
USP46-209ENST00000514536 PLA2G10O15496 165 aa10.75□□□□□ -0.69
USP46-209ENST00000514536 DUS4LO95620 317 aaKnown RBP10.75□□□□□ -0.69
USP46-209ENST00000514536 HIST1H1BP16401 226 aaKnown RBP10.75□□□□□ -0.69
USP46-209ENST00000514536 EXOSC2Q13868 293 aaKnown RBP10.75□□□□□ -0.69
USP46-209ENST00000514536 TMEM128Q5BJH2 165 aa10.75□□□□□ -0.69
USP46-209ENST00000514536 Q6ZRM9 215 aa10.75□□□□□ -0.69
USP46-209ENST00000514536 DLX4Q92988 240 aaPredicted RBP10.75□□□□□ -0.69
USP46-209ENST00000514536 GPR146Q96CH1 333 aa10.75□□□□□ -0.69
USP46-209ENST00000514536 MCRIP2Q9BUT9 160 aaKnown RBP10.75□□□□□ -0.69
USP46-209ENST00000514536 PEF1Q9UBV8 284 aaKnown RBP10.75□□□□□ -0.69
USP46-209ENST00000514536 IGLV11-55A0A075B6I3 123 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 ST8SIA3O43173 380 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 NDUFB6O95139 128 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 TRBV12-3P01733 135 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 ANXA3P12429 323 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 PRCDQ00LT1 54 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 DEFA6Q01524 100 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 KLK9Q2XQG4 91 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 BEAN1Q3B7T3 259 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 SPINK9Q5DT21 86 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 ZNF429Q86V71 674 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms