RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 NDUFC2O95298 119 aa2.58□□□□□ -2
NUP54-209ENST00000510569 INSP01308 110 aa2.58□□□□□ -2
NUP54-209ENST00000510569 IFNA17P01571 189 aa2.58□□□□□ -2
NUP54-209ENST00000510569 SERPINE1P05121 402 aa2.58□□□□□ -2
NUP54-209ENST00000510569 LGALS1P09382 135 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 RBMY1DP0C7P1 496 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 RBMY1A1P0DJD3 496 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 ERGP11308 486 aa2.58□□□□□ -2
NUP54-209ENST00000510569 IL1RNP18510 177 aa2.58□□□□□ -2
NUP54-209ENST00000510569 VDAC1P21796 283 aa2.58□□□□□ -2
NUP54-209ENST00000510569 NPY1RP25929 384 aa2.58□□□□□ -2
NUP54-209ENST00000510569 BLVRBP30043 206 aaPredicted RBP2.58□□□□□ -2
NUP54-209ENST00000510569 PRSS3P35030 304 aa2.58□□□□□ -2
NUP54-209ENST00000510569 EMP1P54849 157 aa2.58□□□□□ -2
NUP54-209ENST00000510569 MAXP61244 160 aa2.58□□□□□ -2
NUP54-209ENST00000510569 DAD1P61803 113 aa2.58□□□□□ -2
NUP54-209ENST00000510569 RPS23P62266 143 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 SNRPD2P62316 118 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 SELENOWP63302 87 aa2.58□□□□□ -2
NUP54-209ENST00000510569 PRR3P79522 188 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 PSG9Q00887 426 aa2.58□□□□□ -2
NUP54-209ENST00000510569 INCA1Q0VD86 236 aa2.58□□□□□ -2
NUP54-209ENST00000510569 OCIAD2Q56VL3 154 aa2.58□□□□□ -2
NUP54-209ENST00000510569 FKBP1CQ5VVH2 108 aa2.58□□□□□ -2
NUP54-209ENST00000510569 SCIMPQ6UWF3 145 aa2.58□□□□□ -2
NUP54-209ENST00000510569 PDZD9Q8IXQ8 264 aa2.58□□□□□ -2
NUP54-209ENST00000510569 C11orf72Q8NBR9 251 aa2.58□□□□□ -2
NUP54-209ENST00000510569 OR4E2Q8NGC2 313 aa2.58□□□□□ -2
NUP54-209ENST00000510569 OR8B12Q8NGG6 310 aa2.58□□□□□ -2
NUP54-209ENST00000510569 OR8S1Q8NH09 359 aa2.58□□□□□ -2
NUP54-209ENST00000510569 OR10G6Q8NH81 332 aa2.58□□□□□ -2
NUP54-209ENST00000510569 OR1L1Q8NH94 360 aa2.58□□□□□ -2
NUP54-209ENST00000510569 CT55Q8WUE5 264 aa2.58□□□□□ -2
NUP54-209ENST00000510569 MBD3L1Q8WWY6 194 aa2.58□□□□□ -2
NUP54-209ENST00000510569 CHCHD10Q8WYQ3 142 aaPredicted RBP2.58□□□□□ -2
NUP54-209ENST00000510569 OR5P3Q8WZ94 311 aa2.58□□□□□ -2
NUP54-209ENST00000510569 SLC7A6Q92536 515 aa2.58□□□□□ -2
NUP54-209ENST00000510569 PTX4Q96A99 478 aa2.58□□□□□ -2
NUP54-209ENST00000510569 MALSU1Q96EH3 234 aa2.58□□□□□ -2
NUP54-209ENST00000510569 LYSMD1Q96S90 227 aa2.58□□□□□ -2
NUP54-209ENST00000510569 LXNQ9BS40 222 aa2.58□□□□□ -2
NUP54-209ENST00000510569 GNB1LQ9BYB4 327 aa2.58□□□□□ -2
NUP54-209ENST00000510569 LINC00470Q9BZP3 86 aa2.58□□□□□ -2
NUP54-209ENST00000510569 PBOV1Q9GZY1 135 aa2.58□□□□□ -2
NUP54-209ENST00000510569 OR52D1Q9H346 318 aa2.58□□□□□ -2
NUP54-209ENST00000510569 SLCO1B3Q9NPD5 702 aa2.58□□□□□ -2
NUP54-209ENST00000510569 SAR1AQ9NR31 198 aa2.58□□□□□ -2
NUP54-209ENST00000510569 TMEM100Q9NV29 134 aa2.58□□□□□ -2
NUP54-209ENST00000510569 TMEM38BQ9NVV0 291 aa2.58□□□□□ -2
NUP54-209ENST00000510569 ZNF226Q9NYT6 803 aa2.58□□□□□ -2
NUP54-209ENST00000510569 ERG28Q9UKR5 140 aa2.58□□□□□ -2
NUP54-209ENST00000510569 TRAPPC2LQ9UL33 140 aa2.58□□□□□ -2
NUP54-209ENST00000510569 WASHC3Q9Y3C0 194 aa2.58□□□□□ -2
NUP54-209ENST00000510569 TSC2P49815 1807 aa2.58□□□□□ -2
NUP54-209ENST00000510569 ZNF236Q9UL36 1845 aa2.58□□□□□ -2
NUP54-209ENST00000510569 DENND4AQ7Z401 1863 aa2.58□□□□□ -2
NUP54-209ENST00000510569 C20orf202A1L168 122 aa2.57□□□□□ -2
NUP54-209ENST00000510569 ZNF850A8MQ14 1090 aa2.57□□□□□ -2
NUP54-209ENST00000510569 F6UZH7 168 aa2.57□□□□□ -2
NUP54-209ENST00000510569 INMT-MINDY4F8WBC2 141 aa2.57□□□□□ -2
NUP54-209ENST00000510569 H7C417 338 aa2.57□□□□□ -2
NUP54-209ENST00000510569 TCF21O43680 179 aa2.57□□□□□ -2
NUP54-209ENST00000510569 PROSCO94903 275 aa2.57□□□□□ -2
NUP54-209ENST00000510569 CA2P00918 260 aa2.57□□□□□ -2
NUP54-209ENST00000510569 HBZP02008 142 aa2.57□□□□□ -2
NUP54-209ENST00000510569 RAB3BP20337 219 aa2.57□□□□□ -2
NUP54-209ENST00000510569 EVI2AP22794 236 aa2.57□□□□□ -2
NUP54-209ENST00000510569 CNTFRP26992 372 aa2.57□□□□□ -2
NUP54-209ENST00000510569 PSMB2P49721 201 aa2.57□□□□□ -2
NUP54-209ENST00000510569 EIF2B2P49770 351 aaKnown RBP2.57□□□□□ -2
NUP54-209ENST00000510569 POLR2HP52434 150 aaKnown RBP2.57□□□□□ -2
NUP54-209ENST00000510569 PKIAP61925 76 aa2.57□□□□□ -2
NUP54-209ENST00000510569 NCS1P62166 190 aa2.57□□□□□ -2
NUP54-209ENST00000510569 CACNG7P62955 275 aa2.57□□□□□ -2
NUP54-209ENST00000510569 PPP3R1P63098 170 aa2.57□□□□□ -2
NUP54-209ENST00000510569 HLA-DRB3P79483 266 aa2.57□□□□□ -2
NUP54-209ENST00000510569 FABP5Q01469 135 aa2.57□□□□□ -2
NUP54-209ENST00000510569 IFITM3Q01628 133 aa2.57□□□□□ -2
NUP54-209ENST00000510569 PLCXD2Q0VAA5 305 aa2.57□□□□□ -2
NUP54-209ENST00000510569 TMEM267Q0VDI3 215 aaPredicted RBP2.57□□□□□ -2
NUP54-209ENST00000510569 LAMTOR4Q0VGL1 99 aa2.57□□□□□ -2
NUP54-209ENST00000510569 ARFRP1Q13795 201 aa2.57□□□□□ -2
NUP54-209ENST00000510569 KCNJ8Q15842 424 aa2.57□□□□□ -2
NUP54-209ENST00000510569 NEDD8Q15843 81 aa2.57□□□□□ -2
NUP54-209ENST00000510569 SSX1Q16384 188 aa2.57□□□□□ -2
NUP54-209ENST00000510569 IBA57Q5T440 356 aaKnown RBP2.57□□□□□ -2
NUP54-209ENST00000510569 TEX43Q6ZNM6 134 aa2.57□□□□□ -2
NUP54-209ENST00000510569 CTAGE3PQ8IX95 158 aa2.57□□□□□ -2
NUP54-209ENST00000510569 ACBD7Q8N6N7 88 aa2.57□□□□□ -2
NUP54-209ENST00000510569 TSTD1Q8NFU3 115 aa2.57□□□□□ -2
NUP54-209ENST00000510569 OR10AD1Q8NGE0 317 aa2.57□□□□□ -2
NUP54-209ENST00000510569 OR1N2Q8NGR9 330 aa2.57□□□□□ -2
NUP54-209ENST00000510569 ZNF649Q9BS31 505 aa2.57□□□□□ -2
NUP54-209ENST00000510569 C20orf27Q9GZN8 174 aa2.57□□□□□ -2
NUP54-209ENST00000510569 TMEM222Q9H0R3 208 aa2.57□□□□□ -2
NUP54-209ENST00000510569 RNASE7Q9H1E1 156 aaKnown RBP2.57□□□□□ -2
NUP54-209ENST00000510569 NOX3Q9HBY0 568 aa2.57□□□□□ -2
NUP54-209ENST00000510569 HEBP1Q9NRV9 189 aa2.57□□□□□ -2
NUP54-209ENST00000510569 UQCC1Q9NVA1 299 aa2.57□□□□□ -2
NUP54-209ENST00000510569 DHCR7Q9UBM7 475 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms