RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 HES3Q5TGS1 186 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 STUMQ69YW2 141 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 ABHD12Q8N2K0 398 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 STARD4Q96DR4 205 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 SNHG12Q9BXW3 62 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 MSL2Q9HCI7 577 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 SEPSECSQ9HD40 501 aaKnown RBP7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 IL19Q9UHD0 177 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 DSCAML1Q8TD84 2053 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 HCFC1P51610 2035 aa7.57□□□□□ -1.2
PDGFRA-208ENST00000509490 MED13Q9UHV7 2174 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 PSMB11A5LHX3 300 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF705GA8MUZ8 300 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 DEFB108AA8MXU0 73 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 AGFG2O95081 481 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 RNF224P0DH78 156 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 RPEL1Q2QD12 228 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 FAM71F2Q6NXP2 309 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TPRX1Q8N7U7 411 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 C8orf31Q8N9H6 132 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 OR5B3Q8NH48 314 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 CACNG8Q8WXS5 425 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 IGF2BP2-AS1Q96M15 143 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TECRQ9NZ01 308 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 DOCK7Q96N67 2140 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 CA2P00918 260 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 MSMPQ1L6U9 139 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TM4SF20Q53R12 229 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TIMM23BQ5SRD1 257 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TEX36Q5VZQ5 186 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 SLC25A48Q6ZT89 311 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 Q6ZWC4 215 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TCF23Q7RTU1 214 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 GCNT2Q8N0V5 402 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TMEM190Q8WZ59 177 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF503Q96F45 646 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 COMMD5Q9GZQ3 224 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TECTAO75443 2155 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 DNAJC13O75165 2243 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 SMIM27A0A1W2PRY6 76 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 EREGO14944 169 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 SAA2P0DJI9 122 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TMEM11P17152 192 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 TDGF1P3P51864 188 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 RPS16P62249 146 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF90Q03938 601 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 GAGE1Q13065 139 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 PVRIGQ6DKI7 326 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 MMD2Q8IY49 270 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF596Q8TC21 504 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF714Q96N38 554 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 PROCRQ9UNN8 238 aa7.56□□□□□ -1.2
PDGFRA-208ENST00000509490 IGLV2-8P01709 118 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 TFF1P04155 84 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 SNRPCP09234 159 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 CRISP2P16562 243 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 COMPP49747 757 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 FABP6P51161 128 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 HLA-DRB5Q30154 266 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF833PQ6ZTB9 187 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 OR4A5Q8NH83 315 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 MIEN1Q9BRT3 115 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 PGPEP1LA6NFU8 196 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 PPOXP50336 477 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 TAS2R45P59539 299 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 CLEC12BQ2HXU8 276 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 SPATA31B1PQ5VZV4 182 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 TOMM20LQ6UXN7 152 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 TGIF2LXQ8IUE1 241 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 OR2Z1Q8NG97 314 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 SMIM12Q96EX1 92 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 ENY2Q9NPA8 101 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 OR51B2Q9Y5P1 312 aa7.55□□□□□ -1.2
PDGFRA-208ENST00000509490 TCAPO15273 167 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 IGFBP2P18065 325 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 MRPS11P82912 194 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 EDDM3AQ14507 147 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF124Q15973 351 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 KRTCAP3Q53RY4 240 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 ZNF788Q6ZQV5 615 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 TMEM136Q6ZRR5 245 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 Q8N976 141 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 OR1L6Q8NGR2 347 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 MBD6Q96DN6 1003 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 NABP2Q9BQ15 211 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 RPUSD1Q9UJJ7 312 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 TANC2Q9HCD6 1990 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 IGHV3-64DA0A0J9YX35 117 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 SCGB1D1O95968 90 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 HOXA4Q00056 320 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 PAX2Q02962 417 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 SEM1Q6ZVN7 128 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 MIR17HGQ75NE6 70 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 PIP4P1Q86T03 277 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 CNEP1R1Q8N9A8 125 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 OSR1Q8TAX0 266 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 GAFA1Q96PS6 74 aa7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 OR2V2Q96R30 315 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms