RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PLA2G10O15496 165 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 LGALS1P09382 135 aaKnown RBP14.06□□□□□ -0.16
NPHP4-210ENST00000506941 PSMB6P28072 239 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 AKR1C2P52895 323 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 TMEM187Q14656 261 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 TMED4Q7Z7H5 227 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 SGPP2Q8IWX5 399 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 SELENOHQ8IZQ5 122 aaKnown RBP14.06□□□□□ -0.16
NPHP4-210ENST00000506941 WFDC9Q8NEX5 89 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 OR11H1Q8NG94 326 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 OR1L8Q8NGR8 309 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 S100ZQ8WXG8 99 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 TSC22D3Q99576 134 aa14.06□□□□□ -0.16
NPHP4-210ENST00000506941 SLC25A21Q9BQT8 299 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-210ENST00000506941 CRYGCP07315 174 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 TRAPPC2P0DI81 140 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 TRAPPC2BP0DI82 140 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 CTRB1P17538 263 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 CD33P20138 364 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 DHODHQ02127 395 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 WT1-ASQ06250 92 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 RBMS2Q15434 407 aaKnown RBP14.05□□□□□ -0.16
NPHP4-210ENST00000506941 CTRB2Q6GPI1 263 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 SLC25A42Q86VD7 318 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 OR4A16Q8NH70 328 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 RBPMSQ93062 196 aaKnown RBP14.05□□□□□ -0.16
NPHP4-210ENST00000506941 TMEM56Q96MV1 263 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 CCDC32Q9BV29 185 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 TMEM56-RWDD3S4R434 201 aa14.05□□□□□ -0.16
NPHP4-210ENST00000506941 A0A0B4J293 547 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 C13orf42A0A1B0GVH6 325 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 RHOGP84095 191 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 TMEM268Q5VZI3 342 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 OR1N2Q8NGR9 330 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 OR5B3Q8NH48 314 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 FANCD2OSQ96PS1 177 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 C7orf50Q9BRJ6 194 aaKnown RBP14.04□□□□□ -0.16
NPHP4-210ENST00000506941 SRSF8Q9BRL6 282 aaKnown RBP14.04□□□□□ -0.16
NPHP4-210ENST00000506941 HINT2Q9BX68 163 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 FKBP11Q9NYL4 201 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 DMRT1Q9Y5R6 373 aa14.04□□□□□ -0.16
NPHP4-210ENST00000506941 IGHV4OR15-8A0A075B7B6 117 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 A0A087WW49 117 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 A0A0G2JLM5 398 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 G3V4G9 280 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 ATG12O94817 140 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 NDUFB6O95139 128 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 ZNF616Q08AN1 781 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 KLK9Q2XQG4 91 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 TMEM128Q5BJH2 165 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 THOC7Q6I9Y2 204 aaKnown RBP14.03□□□□□ -0.16
NPHP4-210ENST00000506941 Q6ZRM9 215 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 KLK9Q9UKQ9 250 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 FLVCR2Q9UPI3 526 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 KCNIP3Q9Y2W7 256 aa14.03□□□□□ -0.16
NPHP4-210ENST00000506941 FAM223BA6NKX1 122 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 CENPXA8MT69 81 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 LYRM1O43325 122 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 OR2J3O76001 311 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 OR13C7P0DN81 318 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 IGLL1P15814 213 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 RAB25P57735 213 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 OXLD1Q5BKU9 147 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 SAMD5Q5TGI4 173 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 ZNF429Q86V71 674 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 C1QL4Q86Z23 238 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 FAM223AQ8IWN6 122 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 CENPSQ8N2Z9 138 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 NECAP1Q8NC96 275 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 LSM10Q969L4 123 aaKnown RBP14.02□□□□□ -0.17
NPHP4-210ENST00000506941 RRNAD1Q96FB5 475 aaKnown RBP14.02□□□□□ -0.17
NPHP4-210ENST00000506941 USMG5Q96IX5 58 aa14.02□□□□□ -0.17
NPHP4-210ENST00000506941 IGLV11-55A0A075B6I3 123 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 ST8SIA3O43173 380 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 TRBV12-3P01733 135 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 HSPE1P61604 102 aaKnown RBP14.01□□□□□ -0.17
NPHP4-210ENST00000506941 PRCDQ00LT1 54 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 PPP1R1AQ13522 171 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 ZNF846Q147U1 533 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 ZNF343Q6P1L6 599 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 SLC35G3Q8N808 338 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 RNASE11Q8TAA1 199 aaKnown RBP14.01□□□□□ -0.17
NPHP4-210ENST00000506941 IL22RA2Q969J5 263 aa14.01□□□□□ -0.17
NPHP4-210ENST00000506941 WDR12Q9GZL7 423 aaKnown RBP14.01□□□□□ -0.17
NPHP4-210ENST00000506941 ANKRD34BA5PLL1 514 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 LINC01619G3V211 115 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 NDUFB8O95169 186 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 HSPB1P04792 205 aaKnown RBP14□□□□□ -0.17
NPHP4-210ENST00000506941 OR8U8P0C7N1 319 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 SLURP1P55000 103 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 MFAP2P55001 183 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 ATP5G2Q06055 141 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 EXOSC2Q13868 293 aaKnown RBP14□□□□□ -0.17
NPHP4-210ENST00000506941 C15orf32Q32M92 178 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 ANKRD55Q3KP44 614 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 SPINK9Q5DT21 86 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 HSD17B13Q7Z5P4 300 aaPredicted RBP14□□□□□ -0.17
NPHP4-210ENST00000506941 FAM219AQ8IW50 185 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 GPR146Q96CH1 333 aa14□□□□□ -0.17
NPHP4-210ENST00000506941 FBXL7Q9UJT9 491 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms