RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RPEL1Q2QD12 228 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 CENPWQ5EE01 88 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 Q6ZT83 130 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 CADP27708 2225 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 C21orf140B9A014 251 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 RHOBP62745 196 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 RANP62826 216 aaKnown RBP9.76□□□□□ -0.85
UBE3D-206ENST00000505226 PQLC2Q6ZP29 291 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 FAM214BQ7L5A3 538 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 CNEP1R1Q8N9A8 125 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 S1PR3Q99500 378 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 SFXN3Q9BWM7 321 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 LPAR2Q9HBW0 351 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 CLCF1Q9UBD9 225 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 PPIAL4AQ9Y536 164 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 C15orf61A6NNL5 157 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 TFPI2P48307 235 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 TCL1AP56279 114 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 ERVK-16P61578 105 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 BATFQ16520 125 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 FAM216AQ8WUB2 273 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 VAMP8Q9BV40 100 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 SAMD10Q9BYL1 202 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 JPT1Q9UK76 154 aa9.76□□□□□ -0.85
UBE3D-206ENST00000505226 TRAV9-1A0A075B6T8 112 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 TRGV8A0A0C4DH27 118 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 NPY1RP25929 384 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 PSG5Q15238 335 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 MLANAQ16655 118 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 SLC24A4Q8NFF2 622 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 TRIB1Q96RU8 372 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 CD46P15529 392 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 KIR2DL2P43627 348 aaPredicted RBP9.75□□□□□ -0.85
UBE3D-206ENST00000505226 KRTDAPP60985 99 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 GUSBP1Q15486 140 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 TMEM183BQ1AE95 376 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 CT45A1Q5HYN5 189 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 TMEM136Q6ZRR5 245 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 UBALD2Q8IYN6 164 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 OR2Z1Q8NG97 314 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 CT45A3Q8NHU0 189 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 GNB1LQ9BYB4 327 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 TMEM14BQ9NUH8 114 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 DSCAMO60469 2012 aa9.75□□□□□ -0.85
UBE3D-206ENST00000505226 HELTA6NFD8 242 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 M0QZK8 103 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 IGLV2-8P01709 118 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 CR1LQ2VPA4 569 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 FAM201AQ5SY85 155 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 DUX4L9Q6RFH8 374 aaPredicted RBP9.74□□□□□ -0.85
UBE3D-206ENST00000505226 GOLT1BQ9Y3E0 138 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 TBL2Q9Y4P3 447 aaKnown RBP9.74□□□□□ -0.85
UBE3D-206ENST00000505226 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 A0A1W2PS18 150 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 GGTLC3B5MD39 225 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 F2RL2O00254 374 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 AREGP15514 252 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 CTRLP40313 264 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 ZNF83P51522 516 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 CX3CL1P78423 397 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 GCSAMQ8N6F7 178 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 NEUROG1Q92886 237 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 UHRF2Q96PU4 802 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 IDI2-AS1Q9NZ38 188 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 NAT8BQ9UHF3 227 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 PCNX2A6NKB5 2137 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 SAA2-SAA4A0A096LPE2 208 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 CA1P00915 261 aaPredicted RBP9.74□□□□□ -0.85
UBE3D-206ENST00000505226 OR10J4P0C629 311 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 SAA2P0DJI9 122 aaPredicted RBP9.74□□□□□ -0.85
UBE3D-206ENST00000505226 GNG4P50150 75 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 C1orf210Q8IVY1 113 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 HINT2Q9BX68 163 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 NRN1Q9NPD7 142 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 SLC45A2Q9UMX9 530 aa9.74□□□□□ -0.85
UBE3D-206ENST00000505226 ICE1Q9Y2F5 2266 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 A8MXE2 369 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 SRRM5B3KS81 715 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 CGB3P0DN86 165 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 CGB7P0DN87 165 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 HSPE1P61604 102 aaKnown RBP9.73□□□□□ -0.85
UBE3D-206ENST00000505226 SIGLECL1Q8N7X8 197 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 FAM168AQ92567 244 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 IGHV2OR16-5A0A0B4J2B6 119 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 IGHV1-18A0A0C4DH31 117 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 MORN5Q5VZ52 161 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 TRAT1Q6PIZ9 186 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 INTS1Q8N201 2190 aaKnown RBP9.73□□□□□ -0.85
UBE3D-206ENST00000505226 C9orf106Q8NAJ2 232 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 NABP2Q9BQ15 211 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 CALYQ9NYX4 217 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 ZNRD1Q9P1U0 126 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 FOXA2Q9Y261 457 aaPredicted RBP9.73□□□□□ -0.85
UBE3D-206ENST00000505226 DIRC3C9JPN6 131 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 BMPR1BO00238 502 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 MMDQ15546 238 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 LINC00479Q96M42 142 aa9.73□□□□□ -0.85
UBE3D-206ENST00000505226 ARRDC1-AS1Q9H2J1 176 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms