RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 PPP5D1E7EU14 171 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 UPK1AO00322 258 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 EEF1E1O43324 174 aaKnown RBP3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR2T1O43869 369 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR2A4O95047 310 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 IFNGP01579 166 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 PPBPP02775 128 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 SERPINA7P05543 415 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 CRYGDP07320 174 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR4A8P0C604 315 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR13C7P0DN81 318 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR1E2P47887 323 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 TMBIM6P55061 237 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 AQP4P55087 323 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 GFERP55789 205 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 GABARAPL2P60520 117 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 SNRPGP62308 76 aaKnown RBP3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 RPL23P62829 140 aaKnown RBP3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 EIF3IQ13347 325 aaKnown RBP3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 C16orf72Q14CZ0 275 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 PRR30Q53SZ7 412 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF343Q6P1L6 599 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF613Q6PF04 617 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OPN5Q6U736 354 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 LINC00299Q6ZSB3 139 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 MSRB3Q8IXL7 192 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 C1orf158Q8N1D5 194 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 RNF175Q8N4F7 328 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 SLC35G3Q8N808 338 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 BPIFB6Q8NFQ5 453 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR10G2Q8NGC3 310 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR52L1Q8NGH7 329 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR13C6PQ8NH95 151 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNRF2Q8NHG8 242 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 RHOXF1Q8NHV9 184 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 GRPEL2Q8TAA5 225 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 GHSRQ92847 366 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 MAL2Q969L2 176 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF501Q96CX3 271 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 DIRAS2Q96HU8 199 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 C18orf15Q96N68 181 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF285Q96NJ3 590 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR2A7Q96R45 310 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR7D2Q96RA2 312 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 TSC22D3Q99576 134 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 PRSS27Q9BQR3 290 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 GINS3Q9BRX5 216 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 SLC25A2Q9BXI2 301 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 GNB1LQ9BYB4 327 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 CCDC90BQ9GZT6 254 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 HEXA-AS1Q9H8Q6 139 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZDHHC11Q9H8X9 412 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 CXorf21Q9HAI6 301 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 GLS2Q9UI32 602 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 KLF13Q9Y2Y9 288 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 MED31Q9Y3C7 131 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 MYLKQ15746 1914 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 ITPR2Q14571 2701 aa3.18□□□□□ -1.9
HMGB1P21-201ENST00000502313 TEX15Q9BXT5 2789 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 NAV2Q8IVL1 2488 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 RP1L1Q8IWN7 2480 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 TDRD6O60522 2096 aaKnown RBP3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 PIKFYVEQ9Y2I7 2098 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 CSMD2Q7Z408 3487 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 IGHV5-51A0A0C4DH38 117 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 A0A0J9YXY3 114 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 TEX50A0A1B0GTY4 177 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 PNMA8CA0A1B0GUJ8 204 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 SHISA9B4DS77 424 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 M0R1X1 148 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 CYB5R3P00387 301 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 IGF2P01344 180 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 S100GP29377 79 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 EIF1P41567 113 aaKnown RBP3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 DAPP51397 102 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 SYNJ2BPP57105 145 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 HIST1H3AP68431 136 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 H3F3AP84243 136 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 SPCS2Q15005 226 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF141Q15928 474 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 FBXL19-AS1Q494R0 122 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 CCDC58Q4VC31 144 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 COA6Q5JTJ3 125 aaKnown RBP3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 FAM222AQ5U5X8 452 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF773Q6PK81 442 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 SCGB1D4Q6XE38 83 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 HIST2H3AQ71DI3 136 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 MOB1BQ7L9L4 216 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 VN1R4Q7Z5H5 301 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF614Q8N883 585 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR52R1Q8NGF1 315 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR9A2Q8NGT5 310 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF563Q8TA94 476 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 RAB2BQ8WUD1 216 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 MARVELD1Q9BSK0 173 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF717Q9BY31 904 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 SAMD10Q9BYL1 202 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 DEFB126Q9BYW3 111 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 TBL1XR1Q9BZK7 514 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms