RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	AKIP1	Q9NQ31	210 aa		7.6	□□□□□ -1.19
CALD1-223	ENST00000496024	PRR13	Q9NZ81	148 aa		7.6	□□□□□ -1.19
CALD1-223	ENST00000496024	ZNF257	Q9Y2Q1	563 aa		7.6	□□□□□ -1.19
CALD1-223	ENST00000496024	IGLC7	A0M8Q6	106 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	CRYM-AS1	A6NIL9	109 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	DBX1	A6NMT0	343 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	C15orf61	A6NNL5	157 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	NPIPB5	A8MRT5	1133 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	LINC01619	G3V211	115 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	OR8U8	P0C7N1	319 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	OR13C7	P0DN81	318 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	UCP1	P25874	307 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	CCR6	P51684	374 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	ATP5G2	Q06055	141 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	SPINK9	Q5DT21	86 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	SGPP2	Q8IWX5	399 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	DCUN1D4	Q92564	292 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	TMEM230	Q96A57	120 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	RRNAD1	Q96FB5	475 aa	Known RBP	7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	RCC1L	Q96I51	464 aa	Known RBP	7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	TSC22D3	Q99576	134 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	TMEM222	Q9H0R3	208 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	FBXL7	Q9UJT9	491 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	PRND	Q9UKY0	176 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024		S4R3C0	116 aa		7.59	□□□□□ -1.19
CALD1-223	ENST00000496024	TRBV9	A0A0B4J1U6	114 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	ATG12	O94817	140 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	NDUFB8	O95169	186 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	DHFR	P00374	187 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	TRBV12-3	P01733	135 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	IGHV3-23	P01764	117 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	HSPB1	P04792	205 aa	Known RBP	7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	IL7	P13232	177 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	CTRB1	P17538	263 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	HOXD3	P31249	432 aa	Predicted RBP	7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	DHODH	Q02127	395 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	WT1-AS	Q06250	92 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	FHL3	Q13643	280 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	EXOSC2	Q13868	293 aa	Known RBP	7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	C15orf32	Q32M92	178 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	BEAN1	Q3B7T3	259 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	TMEM268	Q5VZI3	342 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	CTRB2	Q6GPI1	263 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	SLC25A24	Q6NUK1	477 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	SELENOH	Q8IZQ5	122 aa	Known RBP	7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	LHFPL5	Q8TAF8	219 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	GLYATL2	Q8WU03	294 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	DLX4	Q92988	240 aa	Predicted RBP	7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	USMG5	Q96IX5	58 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	NDUFA4L2	Q9NRX3	87 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	TMEM14B	Q9NUH8	114 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	FKBP11	Q9NYL4	201 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024	KCNIP3	Q9Y2W7	256 aa		7.58	□□□□□ -1.2
CALD1-223	ENST00000496024		A0A0B4J293	547 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024		A0A0G2JRQ6	117 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	FAM223B	A6NKX1	122 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	SEC14L6	B5MCN3	397 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	OVOL1	O14753	267 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	B3GALNT1	O75752	331 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	BRI3	O95415	125 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	IFNA17	P01571	189 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	CRYGC	P07315	174 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	ZNF343	Q6P1L6	599 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	FAM223A	Q8IWN6	122 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	CADM3	Q8N126	398 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	NECAP1	Q8NC96	275 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	OR5B3	Q8NH48	314 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	LSM10	Q969L4	123 aa	Known RBP	7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	TMEM56	Q96MV1	263 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	FANCD2OS	Q96PS1	177 aa		7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	SLC25A21	Q9BQT8	299 aa	Predicted RBP	7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	MCRIP2	Q9BUT9	160 aa	Known RBP	7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	RANGRF	Q9HD47	186 aa	Predicted RBP	7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	PEF1	Q9UBV8	284 aa	Known RBP	7.57	□□□□□ -1.2
CALD1-223	ENST00000496024	IGHV3-21	A0A0B4J1V1	117 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	NAP1L6	A6NFF2	107 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	CENPX	A8MT69	81 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	ST8SIA3	O43173	380 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	NXPH3	O95157	252 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	DUS4L	O95620	317 aa	Known RBP	7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	CDS2	O95674	445 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	FGF2	P09038	288 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024		P0C879	139 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	HIST1H1B	P16401	226 aa	Known RBP	7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	VAMP1	P23763	118 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	HSPE1	P61604	102 aa	Known RBP	7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	SUPT4H1	P63272	117 aa	Known RBP	7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	TMEM187	Q14656	261 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	THOC7	Q6I9Y2	204 aa	Known RBP	7.56	□□□□□ -1.2
CALD1-223	ENST00000496024		Q6ZRM9	215 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	DEDD2	Q8WXF8	326 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	RBPMS	Q93062	196 aa	Known RBP	7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	GPR146	Q96CH1	333 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	SRSF8	Q9BRL6	282 aa	Known RBP	7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	PDCD10	Q9BUL8	212 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	BATF3	Q9NR55	127 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	PTTG2	Q9NZH5	202 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	CACNG5	Q9UF02	275 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	SORL1	Q92673	2214 aa		7.56	□□□□□ -1.2
CALD1-223	ENST00000496024	IGLV11-55	A0A075B6I3	123 aa		7.55	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms