RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 NDUFA13Q9P0J0 144 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 PRKDCP78527 4128 aaKnown RBP6.75□□□□□ -1.33
ITGB1-217ENST00000494395 IGHV4OR15-8A0A075B7B6 117 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 A0A087WW49 117 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 IGLC7A0M8Q6 106 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 NPIPB5A8MRT5 1133 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 H0Y980 276 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 ACTL6BO94805 426 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 DUS4LO95620 317 aaKnown RBP6.75□□□□□ -1.33
ITGB1-217ENST00000494395 CRYGCP07315 174 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 CTSDP07339 412 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-217ENST00000494395 P0C879 139 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 PGAM2P15259 253 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 AREGP15514 252 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 RPA2P15927 270 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 CTRB1P17538 263 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 G6PCP35575 357 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 PIGPP57054 158 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 OR2B8PP59922 312 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 EGFEM1PQ0D2K5 195 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 KLF9Q13886 244 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-217ENST00000494395 SURF2Q15527 256 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-217ENST00000494395 SCGB2B2Q4G0G5 96 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 CTRB2Q6GPI1 263 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 ZNF343Q6P1L6 599 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 C19orf35Q6ZS72 473 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 DMBX1Q8NFW5 382 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 OR51S1Q8NGJ8 323 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 OR6Q1Q8NGQ2 317 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 OR1N2Q8NGR9 330 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 ZFAND1Q8TCF1 268 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 PHB2Q99623 299 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 RTBDNQ9BSG5 229 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-217ENST00000494395 THAP7Q9BT49 309 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-217ENST00000494395 SRRQ9GZT4 340 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 HRASLSQ9HDD0 168 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 COA4Q9NYJ1 87 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 GPR132Q9UNW8 380 aa6.75□□□□□ -1.33
ITGB1-217ENST00000494395 A0A0G2JLM5 398 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 DISC1C4P0D8 188 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 LINC01619G3V211 115 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 KRASP01116 189 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 IGHV3-11P01762 117 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 PRH1P02810 166 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 OR8U8P0C7N1 319 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 UCP1P25874 307 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 PSMB6P28072 239 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 S100GP29377 79 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 CD40LGP29965 261 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 S100A5P33763 92 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 ERVK-16P61578 105 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 SLC25A42Q86VD7 318 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 Q8N402 240 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 GDPD1Q8N9F7 314 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 USMG5Q96IX5 58 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 SDHCQ99643 169 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-217ENST00000494395 PRRT1Q99946 306 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 SRSF8Q9BRL6 282 aaKnown RBP6.74□□□□□ -1.33
ITGB1-217ENST00000494395 C5orf66Q9H5L9 145 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 ZNF257Q9Y2Q1 563 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 DMRT1Q9Y5R6 373 aa6.74□□□□□ -1.33
ITGB1-217ENST00000494395 C3orf85A0A1B0GTC6 90 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 TEX50A0A1B0GTY4 177 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 FAM223BA6NKX1 122 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 C15orf61A6NNL5 157 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 IGKV1-5P01602 117 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 TRBV12-3P01733 135 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 HSPB1P04792 205 aaKnown RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 SLURP1P55000 103 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 KRTAP10-11P60412 298 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 RHOGP84095 191 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 PDLIM3Q53GG5 364 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 PYDC2Q56P42 97 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 THOC7Q6I9Y2 204 aaKnown RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 FAM223AQ8IWN6 122 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 OR10W1Q8NGF6 305 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 OR1L8Q8NGR8 309 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 DEDD2Q8WXF8 326 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 DCUN1D4Q92564 292 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 DLX4Q92988 240 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 TMEM230Q96A57 120 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 FYTTD1Q96QD9 318 aaKnown RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 MCRIP2Q9BUT9 160 aaKnown RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 QTRT1Q9BXR0 403 aaKnown RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 NDUFA4L2Q9NRX3 87 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 ZNF355PQ9NSJ1 428 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 AURKAIP1Q9NWT8 199 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-217ENST00000494395 NSG2Q9Y328 171 aa6.73□□□□□ -1.33
ITGB1-217ENST00000494395 IGLV11-55A0A075B6I3 123 aa6.72□□□□□ -1.33
ITGB1-217ENST00000494395 A0A0G2JRQ6 117 aa6.72□□□□□ -1.33
ITGB1-217ENST00000494395 C13orf42A0A1B0GVH6 325 aa6.72□□□□□ -1.33
ITGB1-217ENST00000494395 CRYM-AS1A6NIL9 109 aa6.72□□□□□ -1.33
ITGB1-217ENST00000494395 B3GALNT1O75752 331 aa6.72□□□□□ -1.33
ITGB1-217ENST00000494395 PRB2P02812 416 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-217ENST00000494395 REG1AP05451 166 aa6.72□□□□□ -1.33
ITGB1-217ENST00000494395 SERPINE2P07093 398 aa6.72□□□□□ -1.33
ITGB1-217ENST00000494395 RAB25P57735 213 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms