RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 HINT2Q9BX68 163 aa9.9□□□□□ -0.82
CLIP2-209ENST00000493166 TMEM222Q9H0R3 208 aa9.9□□□□□ -0.82
CLIP2-209ENST00000493166 TMEM14BQ9NUH8 114 aa9.9□□□□□ -0.82
CLIP2-209ENST00000493166 LINC00854A0A1B0GVQ3 168 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 NAP1L6A6NFF2 107 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 FAM223BA6NKX1 122 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 RBMXL2O75526 392 aaKnown RBP9.89□□□□□ -0.83
CLIP2-209ENST00000493166 IGKV1-5P01602 117 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 CRYGCP07315 174 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 DEFA4P12838 97 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 IL7P13232 177 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 IGLL1P15814 213 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 AKR1C4P17516 323 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 CTRB1P17538 263 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 MECP2P51608 486 aaKnown RBP9.89□□□□□ -0.83
CLIP2-209ENST00000493166 DHODHQ02127 395 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 OXLD1Q5BKU9 147 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 CTRB2Q6GPI1 263 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 C19orf35Q6ZS72 473 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 LINC00299Q6ZSB3 139 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 TMED4Q7Z7H5 227 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 FAM223AQ8IWN6 122 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 OR10W1Q8NGF6 305 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 OR5B3Q8NH48 314 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 TMEM230Q96A57 120 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 RRNAD1Q96FB5 475 aaKnown RBP9.89□□□□□ -0.83
CLIP2-209ENST00000493166 SLC25A21Q9BQT8 299 aaPredicted RBP9.89□□□□□ -0.83
CLIP2-209ENST00000493166 AKIP1Q9NQ31 210 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 PTTG2Q9NZH5 202 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 KCNIP3Q9Y2W7 256 aa9.89□□□□□ -0.83
CLIP2-209ENST00000493166 NOTCH3Q9UM47 2321 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 IGHV4OR15-8A0A075B7B6 117 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 A0A087WW49 117 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 TRBV9A0A0B4J1U6 114 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 IGLC7A0M8Q6 106 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 DBX1A6NMT0 343 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 CENPXA8MT69 81 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 LINC01619G3V211 115 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 OR2J3O76001 311 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 DUS4LO95620 317 aaKnown RBP9.88□□□□□ -0.83
CLIP2-209ENST00000493166 CDS2O95674 445 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 HSPB1P04792 205 aaKnown RBP9.88□□□□□ -0.83
CLIP2-209ENST00000493166 IZUMO4Q1ZYL8 232 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 HSD17B13Q7Z5P4 300 aaPredicted RBP9.88□□□□□ -0.83
CLIP2-209ENST00000493166 NECAP1Q8NC96 275 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 GLYATL2Q8WU03 294 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 S100ZQ8WXG8 99 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 RBPMSQ93062 196 aaKnown RBP9.88□□□□□ -0.83
CLIP2-209ENST00000493166 LSM10Q969L4 123 aaKnown RBP9.88□□□□□ -0.83
CLIP2-209ENST00000493166 TMEM56Q96MV1 263 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 MCRIP2Q9BUT9 160 aaKnown RBP9.88□□□□□ -0.83
CLIP2-209ENST00000493166 NDUFA4L2Q9NRX3 87 aa9.88□□□□□ -0.83
CLIP2-209ENST00000493166 ANKRD34BA5PLL1 514 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 CYB5BO43169 146 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 P0C879 139 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 OR13C7P0DN81 318 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 ANXA3P12429 323 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 HIST1H1BP16401 226 aaKnown RBP9.87□□□□□ -0.83
CLIP2-209ENST00000493166 CCR6P51684 374 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 SLURP1P55000 103 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 ATP5G2Q06055 141 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 WT1-ASQ06250 92 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 EXOSC2Q13868 293 aaKnown RBP9.87□□□□□ -0.83
CLIP2-209ENST00000493166 RBMS2Q15434 407 aaKnown RBP9.87□□□□□ -0.83
CLIP2-209ENST00000493166 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 TMEM268Q5VZI3 342 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 ZNF343Q6P1L6 599 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 LHFPL5Q8TAF8 219 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 GALNT14Q96FL9 552 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 C7orf50Q9BRJ6 194 aaKnown RBP9.87□□□□□ -0.83
CLIP2-209ENST00000493166 GPR61Q9BZJ8 451 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 RANGRFQ9HD47 186 aaPredicted RBP9.87□□□□□ -0.83
CLIP2-209ENST00000493166 FBXL7Q9UJT9 491 aa9.87□□□□□ -0.83
CLIP2-209ENST00000493166 SUPT4H1P63272 117 aaKnown RBP9.86□□□□□ -0.83
CLIP2-209ENST00000493166 TMEM187Q14656 261 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 ZNF429Q86V71 674 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 FAM219AQ8IW50 185 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 SELENOHQ8IZQ5 122 aaKnown RBP9.86□□□□□ -0.83
CLIP2-209ENST00000493166 CENPSQ8N2Z9 138 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 FANCD2OSQ96PS1 177 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 PDCD10Q9BUL8 212 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 CCDC32Q9BV29 185 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 PRR13Q9NZ81 148 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 PEF1Q9UBV8 284 aaKnown RBP9.86□□□□□ -0.83
CLIP2-209ENST00000493166 TMEM56-RWDD3S4R434 201 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 DNAH3Q8TD57 4116 aa9.86□□□□□ -0.83
CLIP2-209ENST00000493166 IGLV11-55A0A075B6I3 123 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 A0A0B4J293 547 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 A0A0G2JRQ6 117 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 OVOL1O14753 267 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 ST8SIA3O43173 380 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 IFNA17P01571 189 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 ZP3P21754 424 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 VAMP1P23763 118 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 HSPE1P61604 102 aaKnown RBP9.85□□□□□ -0.83
CLIP2-209ENST00000493166 SRPXP78539 464 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 PRCDQ00LT1 54 aa9.85□□□□□ -0.83
CLIP2-209ENST00000493166 DEFA6Q01524 100 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms