RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 TRAPPC2P0DI81 140 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 TRAPPC2BP0DI82 140 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 CTRB1P17538 263 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 EXOSC2Q13868 293 aaKnown RBP12.12□□□□□ -0.47
LMX1A-204ENST00000489443 SP6Q3SY56 376 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 CADM3Q8N126 398 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 OR4A16Q8NH70 328 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 TSC22D3Q99576 134 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 RTBDNQ9BSG5 229 aaPredicted RBP12.12□□□□□ -0.47
LMX1A-204ENST00000489443 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
LMX1A-204ENST00000489443 SCP2D1Q9UJQ7 156 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 FBXL7Q9UJT9 491 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 PRNDQ9UKY0 176 aa12.12□□□□□ -0.47
LMX1A-204ENST00000489443 TEX13DA0A0J9YY54 714 aaPredicted RBP12.11□□□□□ -0.47
LMX1A-204ENST00000489443 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 ZP3P21754 424 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 EGFEM1PQ0D2K5 195 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
LMX1A-204ENST00000489443 TRIM16LQ309B1 348 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 C15orf32Q32M92 178 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 TOMM5Q8N4H5 51 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 OR6Q1Q8NGQ2 317 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 FANCD2OSQ96PS1 177 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
LMX1A-204ENST00000489443 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 NDUFB8O95169 186 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 OR13C7P0DN81 318 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 AKR1C2P52895 323 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 AP3S2P59780 193 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 KLF9Q13886 244 aaPredicted RBP12.1□□□□□ -0.47
LMX1A-204ENST00000489443 MRAPQ8TCY5 172 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 TRIM63Q969Q1 353 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
LMX1A-204ENST00000489443 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 TMEM14BQ9NUH8 114 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 SLC2A8Q9NY64 477 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
LMX1A-204ENST00000489443 SORL1Q92673 2214 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 SAP30O75446 220 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 ATG12O94817 140 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 IGKV1-5P01602 117 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 IGHV3-23P01764 117 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 HIST1H1BP16401 226 aaKnown RBP12.09□□□□□ -0.47
LMX1A-204ENST00000489443 FAUP35544 74 aaKnown RBP12.09□□□□□ -0.47
LMX1A-204ENST00000489443 ETV6P41212 452 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 MECP2P51608 486 aaKnown RBP12.09□□□□□ -0.47
LMX1A-204ENST00000489443 WT1-ASQ06250 92 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 IZUMO4Q1ZYL8 232 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 THOC7Q6I9Y2 204 aaKnown RBP12.09□□□□□ -0.47
LMX1A-204ENST00000489443 SCGB3A2Q96PL1 93 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 NAA60Q9H7X0 242 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 ZMAT5Q9UDW3 170 aaKnown RBP12.09□□□□□ -0.47
LMX1A-204ENST00000489443 S4R3C0 116 aa12.09□□□□□ -0.47
LMX1A-204ENST00000489443 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.08□□□□□ -0.48
LMX1A-204ENST00000489443 WI2-2373I1.2A0A1W2PRP0 233 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 B3GALNT1O75752 331 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 OR5AC1P0C628 307 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 UCP1P25874 307 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 INSL3P51460 131 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 SYNJ2BPP57105 145 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
LMX1A-204ENST00000489443 RPEL1Q2QD12 228 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 ZNF57Q68EA5 555 aaPredicted RBP12.08□□□□□ -0.48
LMX1A-204ENST00000489443 ACSM6Q6P461 480 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 HSD17B13Q7Z5P4 300 aaPredicted RBP12.08□□□□□ -0.48
LMX1A-204ENST00000489443 ZNF429Q86V71 674 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 GDPD1Q8N9F7 314 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 OR5B3Q8NH48 314 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 RNASE11Q8TAA1 199 aaKnown RBP12.08□□□□□ -0.48
LMX1A-204ENST00000489443 LSM10Q969L4 123 aaKnown RBP12.08□□□□□ -0.48
LMX1A-204ENST00000489443 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
LMX1A-204ENST00000489443 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 PPP5D1E7EU14 171 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 BMPR1BO00238 502 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 CYB5BO43169 146 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 SLC25A24Q6NUK1 477 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 GLYATL2Q8WU03 294 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 RRNAD1Q96FB5 475 aaKnown RBP12.07□□□□□ -0.48
LMX1A-204ENST00000489443 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 ELOVL1Q9BW60 279 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 SRRQ9GZT4 340 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 DMRT1Q9Y5R6 373 aa12.07□□□□□ -0.48
LMX1A-204ENST00000489443 A0A0B4J293 547 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 K7EIL1 84 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 AKR1C4P17516 323 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 INPP1P49441 399 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 HSPE1P61604 102 aaKnown RBP12.06□□□□□ -0.48
LMX1A-204ENST00000489443 DHODHQ02127 395 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 TATDN3Q17R31 274 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 KLK9Q2XQG4 91 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 CLEC19AQ6UXS0 136 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 EEF1AKMT3Q96AZ1 226 aa12.06□□□□□ -0.48
LMX1A-204ENST00000489443 KLK9Q9UKQ9 250 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms