RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ERGP11308 486 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 AKR1C4P17516 323 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 GPX2P18283 190 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 CXCR1P25024 350 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 RPL12P30050 165 aaKnown RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 PYCR1P32322 319 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 TTPAP49638 278 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 ZNF140P52738 457 aaPredicted RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 AKR1C2P52895 323 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 CTBP2P56545 445 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 MTPNP58546 118 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 TPI1P60174 286 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 CKS1BP61024 79 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 RPS23P62266 143 aaKnown RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 TBPL1P62380 186 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 PRR3P79522 188 aaKnown RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 FABP5Q01469 135 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 PPP1R1AQ13522 171 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 MAPK14Q16539 360 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 SNRNP35Q16560 246 aaKnown RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 ORMDL2Q53FV1 153 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 PYDC2Q56P42 97 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 KPRPQ5T749 579 aaPredicted RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 ALKAL2Q6UX46 152 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 HEPN1Q6WQI6 88 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 HIST2H3AQ71DI3 136 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 NEGR1Q7Z3B1 354 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 OR4K5Q8NGD3 323 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 OR4P4Q8NGL7 312 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 OR4C13Q8NGP0 309 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 OR2T35Q8NGX2 323 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 HAVCR2Q8TDQ0 301 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 POP5Q969H6 163 aaKnown RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 ARL11Q969Q4 196 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 RBMXL1Q96E39 390 aaKnown RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 REEP6Q96HR9 211 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 DIRAS2Q96HU8 199 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 FAM19A4Q96LR4 140 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 YPEL4Q96NS1 127 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 OR7D2Q96RA2 312 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 FAAP24Q9BTP7 215 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 TAPBPLQ9BX59 468 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 OR8D2Q9GZM6 311 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 OR51E2Q9H255 320 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 UQCC1Q9NVA1 299 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 RBM22Q9NW64 420 aaKnown RBP eCLIP2.18□□□□□ -2.06
SSR1-209ENST00000488834 MARCOQ9UEW3 520 aaPredicted RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 ZNF230Q9UIE0 474 aaPredicted RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 ORC6Q9Y5N6 252 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 SCN1AP35498 2009 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 NUP205Q92621 2012 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 NUP153P49790 1475 aaKnown RBP2.18□□□□□ -2.06
SSR1-209ENST00000488834 FRMPD1Q5SYB0 1578 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 DLEC1Q9Y238 1755 aa2.18□□□□□ -2.06
SSR1-209ENST00000488834 PRG4Q92954 1404 aaPredicted RBP2.17□□□□□ -2.06
SSR1-209ENST00000488834 ARAP2Q8WZ64 1704 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 TSC2P49815 1807 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 IGHV3OR16-9A0A0B4J2B5 98 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 IGSF23A1L1A6 192 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 C7orf77A4D0Y5 90 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 RBFOX3A6NFN3 312 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SMIM9A6NGZ8 99 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 BBIP1A8MTZ0 92 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 ZNF670-ZNF695F2Z2N8 137 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 MFNGO00587 321 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 OR7C2O60412 319 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 GPR75O95800 540 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 C1QAP02745 245 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 IL5P05113 134 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SOD3P08294 240 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 MMP7P09237 267 aaPredicted RBP2.17□□□□□ -2.06
SSR1-209ENST00000488834 CD99P14209 185 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 IL1RNP18510 177 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 TSPOP30536 169 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SDC2P34741 201 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 APLNRP35414 380 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 ZNF138P52744 262 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 BTG2P78543 158 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 PRDX1Q06830 199 aaKnown RBP2.17□□□□□ -2.06
SSR1-209ENST00000488834 BAXQ07812 192 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 SMAGPQ0VAQ4 97 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 ZNF235Q14590 738 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 IQCJQ1A5X6 159 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 CLEC12BQ2HXU8 276 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 LRRC75BQ2VPJ9 315 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 CEACAM16Q2WEN9 425 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 TTC32Q5I0X7 151 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 HENMT1Q5T8I9 393 aaKnown RBP2.17□□□□□ -2.06
SSR1-209ENST00000488834 OR10K2Q6IF99 312 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 PRSS54Q6PEW0 395 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 TMEM205Q6UW68 189 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 FAM231DQ6ZW35 169 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 NIT1Q86X76 327 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 LGI3Q8N145 548 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 OR6V1Q8N148 313 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 GATD1Q8NB37 220 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 GPR32P1Q8NGA4 272 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 OR52E4Q8NGH9 312 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 BLNKQ8WV28 456 aa2.17□□□□□ -2.06
SSR1-209ENST00000488834 RERGQ96A58 199 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms