RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 RANGRFQ9HD47 186 aaPredicted RBP11.65□□□□□ -0.54
CXCL12-207ENST00000488591 NSG2Q9Y328 171 aa11.65□□□□□ -0.54
CXCL12-207ENST00000488591 TRBV9A0A0B4J1U6 114 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 A0A1B0GW64 132 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 RBMXL2O75526 392 aaKnown RBP11.64□□□□□ -0.55
CXCL12-207ENST00000488591 IGKV1-39P01597 117 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 PRH1P02810 166 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 IGKV1D-39P04432 117 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 AREGP15514 252 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 AKR1C2P52895 323 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 DHODHQ02127 395 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 ZNF45Q02386 682 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 KPRPQ5T749 579 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-207ENST00000488591 SGPP2Q8IWX5 399 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 OR5B3Q8NH48 314 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 RNASE11Q8TAA1 199 aaKnown RBP11.64□□□□□ -0.55
CXCL12-207ENST00000488591 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 AKIP1Q9NQ31 210 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 MEGF8Q7Z7M0 2845 aa11.64□□□□□ -0.55
CXCL12-207ENST00000488591 IGHV4OR15-8A0A075B7B6 117 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 A0A087WW49 117 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 ANKRD34BA5PLL1 514 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 CRYM-AS1A6NIL9 109 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 REG1AP05451 166 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 CTRB1P17538 263 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 ZP3P21754 424 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 UCP1P25874 307 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 MECP2P51608 486 aaKnown RBP11.63□□□□□ -0.55
CXCL12-207ENST00000488591 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 ZNF343Q6P1L6 599 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 LSM10Q969L4 123 aaKnown RBP11.63□□□□□ -0.55
CXCL12-207ENST00000488591 RRNAD1Q96FB5 475 aaKnown RBP11.63□□□□□ -0.55
CXCL12-207ENST00000488591 TMEM222Q9H0R3 208 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 NDUFA4L2Q9NRX3 87 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 TMEM14BQ9NUH8 114 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 PEF1Q9UBV8 284 aaKnown RBP11.63□□□□□ -0.55
CXCL12-207ENST00000488591 ZMAT5Q9UDW3 170 aaKnown RBP11.63□□□□□ -0.55
CXCL12-207ENST00000488591 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
CXCL12-207ENST00000488591 IGLC7A0M8Q6 106 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 A6NHS1 94 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 C15orf61A6NNL5 157 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 OVOL1O14753 267 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 OR2J3O76001 311 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 OR5AC1P0C628 307 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 OR13C7P0DN81 318 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 SLURP1P55000 103 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 DEFA5Q01523 94 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 DCUN1D4Q92564 292 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 SLC25A21Q9BQT8 299 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-207ENST00000488591 THYN1Q9P016 225 aa11.62□□□□□ -0.55
CXCL12-207ENST00000488591 NAP1L6A6NFF2 107 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 CENPXA8MT69 81 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 SEC14L6B5MCN3 397 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 CDS2O95674 445 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 IGKV1-5P01602 117 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 AKR1C4P17516 323 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 EXOSC2Q13868 293 aaKnown RBP11.61□□□□□ -0.55
CXCL12-207ENST00000488591 BAK1Q16611 211 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 REC114Q7Z4M0 266 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 OR10W1Q8NGF6 305 aa11.61□□□□□ -0.55
CXCL12-207ENST00000488591 DLX4Q92988 240 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-207ENST00000488591 ANXA3P12429 323 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 HOXD3P31249 432 aaPredicted RBP11.6□□□□□ -0.55
CXCL12-207ENST00000488591 HSPE1P61604 102 aaKnown RBP11.6□□□□□ -0.55
CXCL12-207ENST00000488591 TATDN3Q17R31 274 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 KLK9Q2XQG4 91 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 C19orf35Q6ZS72 473 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 LINC00299Q6ZSB3 139 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 TMED4Q7Z7H5 227 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 FAM219AQ8IW50 185 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 GLYATL2Q8WU03 294 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
CXCL12-207ENST00000488591 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 FANCD2OSQ96PS1 177 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 PDCD10Q9BUL8 212 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 BATF3Q9NR55 127 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 KLK9Q9UKQ9 250 aa11.6□□□□□ -0.55
CXCL12-207ENST00000488591 IGLV11-55A0A075B6I3 123 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.59□□□□□ -0.55
CXCL12-207ENST00000488591 PIGBOS1A0A0B4J2F0 54 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 DBX1A6NMT0 343 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 NDUFB8O95169 186 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 INSL3P51460 131 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 WT1-ASQ06250 92 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 RPEL1Q2QD12 228 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 CNPY1Q3B7I2 92 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 SELENOHQ8IZQ5 122 aaKnown RBP11.59□□□□□ -0.55
CXCL12-207ENST00000488591 IL22RA2Q969J5 263 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 EEF1AKMT3Q96AZ1 226 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms