RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 KCNE1P15382 129 aa0.73□□□□□ -2.29
PTEN-204ENST00000487939 RPL18Q07020 188 aaKnown RBP0.73□□□□□ -2.29
PTEN-204ENST00000487939 DMTNQ08495 405 aa0.73□□□□□ -2.29
PTEN-204ENST00000487939 ZNF439Q8NDP4 499 aa0.73□□□□□ -2.29
PTEN-204ENST00000487939 OR5B17Q8NGF7 314 aa0.73□□□□□ -2.29
PTEN-204ENST00000487939 ATP6V1G3Q96LB4 118 aa0.73□□□□□ -2.29
PTEN-204ENST00000487939 PLEKHJ1Q9NW61 149 aa0.73□□□□□ -2.29
PTEN-204ENST00000487939 PAQR5Q9NXK6 330 aaPredicted RBP0.73□□□□□ -2.29
PTEN-204ENST00000487939 C15orf41Q9Y2V0 281 aa0.73□□□□□ -2.29
PTEN-204ENST00000487939 GGT3PA6NGU5 568 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 GOLGA8KD6RF30 607 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 PFDN6O15212 129 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 YEATS4O95619 227 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 REG1AP05451 166 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 CCL1P22362 96 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 CD151P48509 253 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 RUNX1Q01196 453 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 OR4C6Q8NH72 309 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 C11orf40Q8WZ69 217 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 AQP3Q92482 292 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 MAP1LC3AQ9H492 121 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 FAM96AQ9H5X1 160 aa0.72□□□□□ -2.29
PTEN-204ENST00000487939 MED12LQ86YW9 2145 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 MAST2Q6P0Q8 1798 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.71□□□□□ -2.3
PTEN-204ENST00000487939 A0A087WX48 190 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 C1orf232A0A0U1RR37 186 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 TYMSP04818 313 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 UBE2G2P60604 165 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 MED21Q13503 144 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 GLT8D1Q68CQ7 371 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 AAED1Q7RTV5 226 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 COMMD7Q86VX2 200 aa0.71□□□□□ -2.3
PTEN-204ENST00000487939 ALPK2Q86TB3 2170 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 LINC00854A0A1B0GVQ3 168 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 COCHO43405 550 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 APOEP02649 317 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 KRT7P08729 469 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 EIF2B2P49770 351 aaKnown RBP0.7□□□□□ -2.3
PTEN-204ENST00000487939 ZNF80P51504 273 aaPredicted RBP0.7□□□□□ -2.3
PTEN-204ENST00000487939 SKP1P63208 163 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 ZNF846Q147U1 533 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 RSU1Q15404 277 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 IBA57Q5T440 356 aaKnown RBP0.7□□□□□ -2.3
PTEN-204ENST00000487939 LINC00471Q8N535 108 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 GPR32P1Q8NGA4 272 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 IMP3Q9NV31 184 aaKnown RBP0.7□□□□□ -2.3
PTEN-204ENST00000487939 IL36BQ9NZH7 164 aa0.7□□□□□ -2.3
PTEN-204ENST00000487939 RALGAPA2Q2PPJ7 1873 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 FABP5P3A8MUU1 101 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 C8orf88P0DMB2 117 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 MYL12AP19105 171 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 RPS4Y1P22090 263 aaKnown RBP0.69□□□□□ -2.3
PTEN-204ENST00000487939 SUPT4H1P63272 117 aaKnown RBP0.69□□□□□ -2.3
PTEN-204ENST00000487939 UBE2IP63279 158 aaKnown RBP0.69□□□□□ -2.3
PTEN-204ENST00000487939 STX5Q13190 355 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 TMED1Q13445 227 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 SYPL2Q5VXT5 272 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 ZNF550Q7Z398 422 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 FAM9CQ8IZT9 166 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 WFDC11Q8NEX6 87 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 TMEM106AQ96A25 262 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 DIRAS2Q96HU8 199 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 RP1P56715 2156 aa0.69□□□□□ -2.3
PTEN-204ENST00000487939 TTC21AQ8NDW8 1320 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 STRCQ7RTU9 1775 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 OR5F1O95221 314 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 UCHL3P15374 230 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 RPL12P30050 165 aaKnown RBP0.68□□□□□ -2.3
PTEN-204ENST00000487939 C10orf67Q8IYJ2 551 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 HDHD2Q9H0R4 259 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 EFCAB1Q9HAE3 211 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 ABCC11Q96J66 1382 aa0.68□□□□□ -2.3
PTEN-204ENST00000487939 TRBV6-7A0A0A0MS04 114 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 PRM2P04554 102 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 FAM228BP0C875 321 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 MAP2K4P45985 399 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 BLVRAP53004 296 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 PIGXQ8TBF5 258 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 LINC00526Q96FQ7 95 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 CNBD2Q96M20 576 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 C3orf18Q9UK00 162 aa0.67□□□□□ -2.3
PTEN-204ENST00000487939 LOC110117498A0A087WWA1 95 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 A0A1B0GV50 99 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 M0QX08 132 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 MARCKSL1P49006 195 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 MAP3K7CLP57077 242 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 CCL20P78556 96 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 IFITM2Q01629 132 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 MLLT11Q13015 90 aaPredicted RBP0.66□□□□□ -2.3
PTEN-204ENST00000487939 CLVS2Q5SYC1 327 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 C1orf195Q5TG92 126 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 LCN15Q6UWW0 184 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 DEFB125Q8N687 156 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 RASSF5Q8WWW0 418 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 CFAP53Q96M91 514 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 ANAPC1Q9H1A4 1944 aa0.66□□□□□ -2.3
PTEN-204ENST00000487939 DCCP43146 1447 aa0.65□□□□□ -2.3
PTEN-204ENST00000487939 EXPH5Q8NEV8 1989 aa0.65□□□□□ -2.31
PTEN-204ENST00000487939 NCOA6Q14686 2063 aaPredicted RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms