RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 C15orf61A6NNL5 157 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 SAP30O75446 220 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 CTSDP07339 412 aaPredicted RBP13.06□□□□□ -0.32
HMG20B-212ENST00000487894 ECI1P42126 302 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 ZNF429Q86V71 674 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 CCDC71LQ8N9Z2 235 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 OR1L8Q8NGR8 309 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 NDUFA4L2Q9NRX3 87 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 ZMAT5Q9UDW3 170 aaKnown RBP13.06□□□□□ -0.32
HMG20B-212ENST00000487894 FBXL7Q9UJT9 491 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 OR51B2Q9Y5P1 312 aa13.06□□□□□ -0.32
HMG20B-212ENST00000487894 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.05□□□□□ -0.32
HMG20B-212ENST00000487894 C3orf85A0A1B0GTC6 90 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 DBX1A6NMT0 343 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 BMPR1BO00238 502 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 SNAPC5O75971 98 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 NDUFB8O95169 186 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 DHFRP00374 187 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 SERPINE2P07093 398 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 TRAPPC2P0DI81 140 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 TRAPPC2BP0DI82 140 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 WT1-ASQ06250 92 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
HMG20B-212ENST00000487894 ZNF79Q15937 498 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 CCDC190Q86UF4 302 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 OR51S1Q8NGJ8 323 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 TRIM63Q969Q1 353 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 TSC22D3Q99576 134 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 TMEM14BQ9NUH8 114 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 SLC2A8Q9NY64 477 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 COPZ2Q9P299 210 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 PRNDQ9UKY0 176 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 DMRT1Q9Y5R6 373 aa13.05□□□□□ -0.32
HMG20B-212ENST00000487894 IGKV1-5P01602 117 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 HIST1H1BP16401 226 aaKnown RBP13.04□□□□□ -0.32
HMG20B-212ENST00000487894 S100A5P33763 92 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 SURF2Q15527 256 aaPredicted RBP13.04□□□□□ -0.32
HMG20B-212ENST00000487894 H2BFWTQ7Z2G1 175 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 GDPD1Q8N9F7 314 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 LSM10Q969L4 123 aaKnown RBP13.04□□□□□ -0.32
HMG20B-212ENST00000487894 CCDC140Q96MF4 163 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 PRR25Q96S07 402 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 PRRT1Q99946 306 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
HMG20B-212ENST00000487894 THAP7Q9BT49 309 aaPredicted RBP13.04□□□□□ -0.32
HMG20B-212ENST00000487894 C5orf66Q9H5L9 145 aa13.04□□□□□ -0.32
HMG20B-212ENST00000487894 DNAH9Q9NYC9 4486 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 P0C879 139 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 DEFA4P12838 97 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 UCP1P25874 307 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 SYNJ2BPP57105 145 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 RPEL1Q2QD12 228 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 PYDC2Q56P42 97 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 HSD17B13Q7Z5P4 300 aaPredicted RBP13.03□□□□□ -0.32
HMG20B-212ENST00000487894 OR5B3Q8NH48 314 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 CITED4Q96RK1 184 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 HINT2Q9BX68 163 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 FKBP11Q9NYL4 201 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 GPR132Q9UNW8 380 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 C14orf166Q9Y224 244 aaKnown RBP13.03□□□□□ -0.32
HMG20B-212ENST00000487894 S4R3C0 116 aa13.03□□□□□ -0.32
HMG20B-212ENST00000487894 MFSD2BA6NFX1 497 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 PPP5D1E7EU14 171 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 IGHV3-23P01764 117 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 OR13C7P0DN81 318 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 KLF9Q13886 244 aaPredicted RBP13.02□□□□□ -0.33
HMG20B-212ENST00000487894 IZUMO4Q1ZYL8 232 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 SP6Q3SY56 376 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 FAM209BQ5JX69 171 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 Q8N402 240 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 OR9G4Q8NGQ1 327 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 ELOVL1Q9BW60 279 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 NAA60Q9H7X0 242 aa13.02□□□□□ -0.33
HMG20B-212ENST00000487894 ZNF256Q9Y2P7 627 aaPredicted RBP13.02□□□□□ -0.33
HMG20B-212ENST00000487894 B3GALNT1O75752 331 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 ETV6P41212 452 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 AKR1C2P52895 323 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 TRIM16LQ309B1 348 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 C4orf48Q5BLP8 95 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 IL34Q6ZMJ4 242 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 HAPLN4Q86UW8 402 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 OR4A16Q8NH70 328 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 EEF1AKMT3Q96AZ1 226 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 MCUBQ9NWR8 336 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 SCP2D1Q9UJQ7 156 aa13.01□□□□□ -0.33
HMG20B-212ENST00000487894 F11RQ9Y624 299 aaKnown RBP13.01□□□□□ -0.33
HMG20B-212ENST00000487894 CRYM-AS1A6NIL9 109 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 OR5AC1P0C628 307 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 MFAP2P55001 183 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 PRCDQ00LT1 54 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 CLEC19AQ6UXS0 136 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 OR6Q1Q8NGQ2 317 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 LHFPL5Q8TAF8 219 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 TMEM230Q96A57 120 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 TMEM56Q96MV1 263 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 TMEM222Q9H0R3 208 aa13□□□□□ -0.33
HMG20B-212ENST00000487894 A0A0G2JRQ6 117 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 TEX13DA0A0J9YY54 714 aaPredicted RBP12.99□□□□□ -0.33
HMG20B-212ENST00000487894 IGLV1-51P01701 117 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms