RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FCGR2CP31995 323 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 MAP2K4P45985 399 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 ATP1B3P54709 279 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 HAMPP81172 84 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 PAX5Q02548 391 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 RGS21Q2M5E4 152 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 LRRC37A5PQ49AS3 106 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 CYBRD1Q53TN4 286 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF506Q5JVG8 444 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 LELP1Q5T871 98 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 LINC01590Q5TEZ4 76 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 Q6P435 159 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 CD164L2Q6UWJ8 174 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 BTNL8Q6UX41 500 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF562Q6V9R5 426 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 Q6ZVH6 145 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-217ENST00000487825 C15orf53Q8NAA6 179 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF439Q8NDP4 499 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 OR13F1Q8NGS4 319 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 OR6K6Q8NGW6 343 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 OR6N2Q8NGY6 317 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 OR5B3Q8NH48 314 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 OR10A6Q8NH74 314 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 ZNRF2Q8NHG8 242 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 OR51E1Q8TCB6 317 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 ASB9Q96DX5 294 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 LINC00167Q96N53 147 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 TEAD3Q99594 435 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 YTHDF1Q9BYJ9 559 aaKnown RBP3.09□□□□□ -1.91
BRCA1-217ENST00000487825 C6orf62Q9GZU0 229 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-217ENST00000487825 FBXL15Q9H469 300 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 HMG20AQ9NP66 347 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 FAM206AQ9NX38 181 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 NDUFA13Q9P0J0 144 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 KIF25Q9UIL4 384 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 GSTK1Q9Y2Q3 226 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 V9GYS6 101 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 TRAV18A0A075B6X5 111 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 TRAV26-1A0A087WT03 109 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 A0A1W2PPV4 95 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 FAM168BA1KXE4 195 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 A6NIN4 97 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 DHRS7CA6NNS2 312 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 C15orf65H3BRN8 121 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 SDCBPO00560 298 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 CA1P00915 261 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 CA2P00918 260 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 RPSAP08865 295 aaKnown RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 H2AFXP16104 143 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF19P17023 458 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 SPI1P17947 270 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 FUSP35637 526 aaKnown RBP eCLIP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 OR3A3P47888 321 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 TSPAN5P62079 268 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 SELENOWP63302 87 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 SLAQ13239 276 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 DGCR6Q14129 220 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 PLGLAQ15195 96 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 MAPRE2Q15555 327 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 NHLRC3Q5JS37 347 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 RSBN1Q5VWQ0 802 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 TTC23Q5W5X9 447 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 FAM131AQ6UXB0 335 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 Q6ZSR3 168 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 ERI1Q8IV48 349 aaKnown RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 OR5T1Q8NG75 326 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 OR4A16Q8NH70 328 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 GPX8Q8TED1 209 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 OR52B2Q96RD2 323 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 RAB40CQ96S21 281 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 CNN2Q99439 309 aaKnown RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 CGREF1Q99674 301 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 MRPL20Q9BYC9 149 aaKnown RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 PBOV1Q9GZY1 135 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 GEMIN7Q9H840 131 aaKnown RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 RDH8Q9NYR8 311 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 CCDC167Q9P0B6 97 aa3.08□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF230Q9UIE0 474 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-217ENST00000487825 TMEM269A0A1B0GVZ9 245 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF705EA8MWA4 302 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-217ENST00000487825 FAM220BPB1ANY3 271 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 PRSS46E5RG02 174 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 PPP5D1E7EU14 171 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 BIRC5O15392 142 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF682O95780 498 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 CYB5AP00167 134 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 MBP02144 154 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 TTRP02766 147 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 C8orf88P0DMB2 117 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 DBTP11182 482 aaKnown RBP3.07□□□□□ -1.92
BRCA1-217ENST00000487825 RPS27AP62979 156 aaKnown RBP3.07□□□□□ -1.92
BRCA1-217ENST00000487825 EXOSC2Q13868 293 aaKnown RBP3.07□□□□□ -1.92
BRCA1-217ENST00000487825 CRMP1Q14194 572 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 UBE2V2Q15819 145 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 CT45A1Q5HYN5 189 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 ERASQ7Z444 233 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 COX8CQ7Z4L0 72 aa3.07□□□□□ -1.92
BRCA1-217ENST00000487825 GPHB5Q86YW7 130 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms