RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KLF9Q13886 244 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-207ENST00000486572 CTRB2Q6GPI1 263 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 C19orf35Q6ZS72 473 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 H2BFWTQ7Z2G1 175 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 OR6Q1Q8NGQ2 317 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 OR1L8Q8NGR8 309 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 DLX4Q92988 240 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-207ENST00000486572 AURKAIP1Q9NWT8 199 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-207ENST00000486572 TEX50A0A1B0GTY4 177 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 C15orf61A6NNL5 157 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 B3GALNT1O75752 331 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 OR2J3O76001 311 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 REG1AP05451 166 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 ZP3P21754 424 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 EXOSC2Q13868 293 aaKnown RBP14.01□□□□□ -0.17
COL1A1-207ENST00000486572 C15orf32Q32M92 178 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 HSD17B13Q7Z5P4 300 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-207ENST00000486572 TOMM5Q8N4H5 51 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 OR5B3Q8NH48 314 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 RTBDNQ9BSG5 229 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-207ENST00000486572 C5orf66Q9H5L9 145 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 TMEM14BQ9NUH8 114 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 FKBP11Q9NYL4 201 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 PEF1Q9UBV8 284 aaKnown RBP14.01□□□□□ -0.17
COL1A1-207ENST00000486572 GPR132Q9UNW8 380 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 OR51B2Q9Y5P1 312 aa14.01□□□□□ -0.17
COL1A1-207ENST00000486572 ATG12O94817 140 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 DEFA4P12838 97 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 HIST1H1BP16401 226 aaKnown RBP14□□□□□ -0.17
COL1A1-207ENST00000486572 UCP1P25874 307 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 KRTAP10-11P60412 298 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 KLK9Q2XQG4 91 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 TRIM16LQ309B1 348 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 SP6Q3SY56 376 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 GDPD1Q8N9F7 314 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 OR10W1Q8NGF6 305 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 LSM10Q969L4 123 aaKnown RBP14□□□□□ -0.17
COL1A1-207ENST00000486572 FANCD2OSQ96PS1 177 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 HINT2Q9BX68 163 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 NDUFA4L2Q9NRX3 87 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 FBXL7Q9UJT9 491 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 KLK9Q9UKQ9 250 aa14□□□□□ -0.17
COL1A1-207ENST00000486572 TEX13DA0A0J9YY54 714 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-207ENST00000486572 TRBV12-3P01733 135 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 INSL3P51460 131 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 AKR1C2P52895 323 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 OR4A16Q8NH70 328 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 DEDD2Q8WXF8 326 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 SCGB3A2Q96PL1 93 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 SRRQ9GZT4 340 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 NAA60Q9H7X0 242 aa13.99□□□□□ -0.17
COL1A1-207ENST00000486572 ZMAT5Q9UDW3 170 aaKnown RBP13.99□□□□□ -0.17
COL1A1-207ENST00000486572 IGLV11-55A0A075B6I3 123 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 DBX1A6NMT0 343 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 IGKV1-5P01602 117 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 OR5AC1P0C628 307 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 OR13C7P0DN81 318 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 WT1-ASQ06250 92 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 FAM209BQ5JX69 171 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 TMEM56Q96MV1 263 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 TMEM222Q9H0R3 208 aa13.98□□□□□ -0.17
COL1A1-207ENST00000486572 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.97□□□□□ -0.17
COL1A1-207ENST00000486572 CRYM-AS1A6NIL9 109 aa13.97□□□□□ -0.17
COL1A1-207ENST00000486572 CYB5BO43169 146 aa13.97□□□□□ -0.17
COL1A1-207ENST00000486572 NDUFB8O95169 186 aa13.97□□□□□ -0.17
COL1A1-207ENST00000486572 P0C879 139 aa13.97□□□□□ -0.17
COL1A1-207ENST00000486572 ZNF429Q86V71 674 aa13.97□□□□□ -0.17
COL1A1-207ENST00000486572 SAP30O75446 220 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 CDS2O95674 445 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 MECP2P51608 486 aaKnown RBP13.96□□□□□ -0.17
COL1A1-207ENST00000486572 DHODHQ02127 395 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 KLF5Q13887 457 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-207ENST00000486572 IZUMO4Q1ZYL8 232 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 RPEL1Q2QD12 228 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 ACSM6Q6P461 480 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 SGPP2Q8IWX5 399 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 RNASE11Q8TAA1 199 aaKnown RBP13.96□□□□□ -0.17
COL1A1-207ENST00000486572 MRAPQ8TCY5 172 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 GLYATL2Q8WU03 294 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 EEF1AKMT3Q96AZ1 226 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 THYN1Q9P016 225 aa13.96□□□□□ -0.17
COL1A1-207ENST00000486572 BMPR1BO00238 502 aa13.95□□□□□ -0.18
COL1A1-207ENST00000486572 PRCDQ00LT1 54 aa13.95□□□□□ -0.18
COL1A1-207ENST00000486572 TRIQKQ629K1 86 aa13.95□□□□□ -0.18
COL1A1-207ENST00000486572 ZNF57Q68EA5 555 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-207ENST00000486572 TMEM230Q96A57 120 aa13.95□□□□□ -0.18
COL1A1-207ENST00000486572 RRNAD1Q96FB5 475 aaKnown RBP13.95□□□□□ -0.18
COL1A1-207ENST00000486572 CXorf58Q96LI9 332 aa13.95□□□□□ -0.18
COL1A1-207ENST00000486572 CCDC140Q96MF4 163 aa13.95□□□□□ -0.18
COL1A1-207ENST00000486572 DMRT1Q9Y5R6 373 aa13.95□□□□□ -0.18
COL1A1-207ENST00000486572 F11RQ9Y624 299 aaKnown RBP13.95□□□□□ -0.18
COL1A1-207ENST00000486572 INPP1P49441 399 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 SYNJ2BPP57105 145 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 HSPE1P61604 102 aaKnown RBP13.94□□□□□ -0.18
COL1A1-207ENST00000486572 FAM219AQ8IW50 185 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 LHFPL5Q8TAF8 219 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 RBPMSQ93062 196 aaKnown RBP13.94□□□□□ -0.18
COL1A1-207ENST00000486572 GALNT14Q96FL9 552 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 OR4C12Q96R67 309 aa13.94□□□□□ -0.18
COL1A1-207ENST00000486572 ELOVL1Q9BW60 279 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms