RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 DEFB119Q8N690 84 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 METTL27Q8N6F8 245 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF645Q8N7E2 425 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 Q8N9P0 234 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-212ENST00000477520 OR52E5Q8NH55 327 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 ATP6V0E2Q8NHE4 81 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 SARAFQ96BY9 339 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 GALMQ96C23 342 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 COX14Q96I36 57 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 TIMM29Q9BSF4 260 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 FAM103A1Q9BTL3 118 aaKnown RBP3.92□□□□□ -1.78
PTCD3-212ENST00000477520 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 AICDAQ9GZX7 198 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 MS4A5Q9H3V2 200 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 SCRT2Q9NQ03 307 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF331Q9NQX6 463 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-212ENST00000477520 PILRBQ9UKJ0 227 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 PPIAL4AQ9Y536 164 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 R4GN57 208 aa3.92□□□□□ -1.78
PTCD3-212ENST00000477520 ZFHX2Q9C0A1 2572 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-212ENST00000477520 PCNX2A6NKB5 2137 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 WDR87Q6ZQQ6 2873 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.91□□□□□ -1.78
PTCD3-212ENST00000477520 IGKV1-8A0A0C4DH67 115 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 A0A0G2JLM5 398 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 SPTY2D1-AS1A0A0U1RR47 76 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 A0A1W2PPM0 123 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 A0A1W2PPV4 95 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 IZUMO1RA6ND01 250 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 C2orf70A6NJV1 201 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 C17orf51A8MQB3 221 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM262E9PQX1 116 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 PLPP3O14495 311 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 CER1O95813 267 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 IGLV3-1P01715 115 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 CFIP05156 583 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 IL12BP29460 328 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 NBL1P41271 181 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 IER3P46695 156 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 OR3A4PP47883 348 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 POU3F1Q03052 451 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-212ENST00000477520 SLC38A11Q08AI6 406 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 MALLQ13021 153 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 MYBPHQ13203 477 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 KIR2DS3Q14952 304 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 TRIP6Q15654 476 aaKnown RBP3.91□□□□□ -1.78
PTCD3-212ENST00000477520 PHLDA2Q53GA4 152 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM177Q53S58 311 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM14EPQ6UXP3 125 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF562Q6V9R5 426 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 CPEB2Q7Z5Q1 589 aaKnown RBP3.91□□□□□ -1.78
PTCD3-212ENST00000477520 S100A7AQ86SG5 101 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 MARCH3Q86UD3 253 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 TBC1D26Q86UD7 250 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 RTN4RL2Q86UN3 420 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 HEATR5AQ86XA9 2040 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF547Q8IVP9 402 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 BOD1L2Q8IYS8 172 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM251Q8N6I4 163 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 OR4C3Q8NH37 302 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 OR4A5Q8NH83 315 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF502Q8TBZ5 544 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 OR51E1Q8TCB6 317 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 APOBEC3DQ96AK3 386 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-212ENST00000477520 VSTM2LQ96N03 204 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 OR4C12Q96R67 309 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 VGLL1Q99990 258 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 GTSF1LQ9H1H1 148 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 CENPMQ9NSP4 180 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 NXT1Q9UKK6 140 aaKnown RBP3.91□□□□□ -1.78
PTCD3-212ENST00000477520 ERG28Q9UKR5 140 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 SPCS1Q9Y6A9 102 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 ASCC3Q8N3C0 2202 aaKnown RBP3.91□□□□□ -1.78
PTCD3-212ENST00000477520 GVINP1Q7Z2Y8 2422 aa3.91□□□□□ -1.78
PTCD3-212ENST00000477520 UNC13CQ8NB66 2214 aa3.9□□□□□ -1.78
PTCD3-212ENST00000477520 TRBV7-9A0A0J9YWB2 115 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 A0A1W2PR77 199 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 SMIM27A0A1W2PRY6 76 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 PRSS38A1L453 326 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 CGB1A6NKQ9 187 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 F5H5K5 113 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 SYS1-DBNDD2H3BUS1 97 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 BMPR1BO00238 502 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 MGST3O14880 152 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 RER1O15258 196 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 PDCD6O75340 191 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 TUSC2O75896 110 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 DHRS3O75911 302 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 OR7C1O76099 320 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-212ENST00000477520 NDUFB4O95168 129 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 TMEM50AO95807 157 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 CT45A10P0DMU9 189 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 EGR2P11161 476 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-212ENST00000477520 GP1BBP13224 206 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 CTLA4P16410 223 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 FKBP2P26885 142 aaKnown RBP3.9□□□□□ -1.79
PTCD3-212ENST00000477520 SRIP30626 198 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 OR1D4P47884 311 aa3.9□□□□□ -1.79
PTCD3-212ENST00000477520 FUT6P51993 359 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms