RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 HIST1H1BP16401 226 aaKnown RBP11.02□□□□□ -0.65
BRCA1-211ENST00000472490 PSMB6P28072 239 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 RAB25P57735 213 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 FHL3Q13643 280 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 RBMS2Q15434 407 aaKnown RBP11.02□□□□□ -0.65
BRCA1-211ENST00000472490 DEFB136Q30KP8 78 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 LSM10Q969L4 123 aaKnown RBP11.02□□□□□ -0.65
BRCA1-211ENST00000472490 GALNT14Q96FL9 552 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 TMEM14BQ9NUH8 114 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 THYN1Q9P016 225 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 TEX50A0A1B0GTY4 177 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 E7EUB6 86 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 LINC01619G3V211 115 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 IL7P13232 177 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 AKR1C4P17516 323 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 CTRB1P17538 263 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 SRPXP78539 464 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 RHOGP84095 191 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 TMEM128Q5BJH2 165 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 CTRB2Q6GPI1 263 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 GLYATL2Q8WU03 294 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 RBPMSQ93062 196 aaKnown RBP11.01□□□□□ -0.65
BRCA1-211ENST00000472490 DUX3Q96PT4 197 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 PDCD10Q9BUL8 212 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 CCDC32Q9BV29 185 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 RANGRFQ9HD47 186 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-211ENST00000472490 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 CACFD1Q9UGQ2 172 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 NSG2Q9Y328 171 aa11.01□□□□□ -0.65
BRCA1-211ENST00000472490 TRBV9A0A0B4J1U6 114 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 MYOD1P15172 320 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 AREGP15514 252 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 ZP3P21754 424 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 ATP5G2Q06055 141 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 TMED4Q7Z7H5 227 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 ZNF429Q86V71 674 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 OR1L6Q8NGR2 347 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 IL22RA2Q969J5 263 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 SDHCQ99643 169 aaPredicted RBP11□□□□□ -0.65
BRCA1-211ENST00000472490 HINT2Q9BX68 163 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 AKIP1Q9NQ31 210 aa11□□□□□ -0.65
BRCA1-211ENST00000472490 A0A1B0GW64 132 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 IGLC7A0M8Q6 106 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 IGKV1-5P01602 117 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 PRH1P02810 166 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 OR13C7P0DN81 318 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 MECP2P51608 486 aaKnown RBP10.99□□□□□ -0.65
BRCA1-211ENST00000472490 HSPE1P61604 102 aaKnown RBP10.99□□□□□ -0.65
BRCA1-211ENST00000472490 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 TMEM268Q5VZI3 342 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 ZNF343Q6P1L6 599 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 WDR12Q9GZL7 423 aaKnown RBP10.99□□□□□ -0.65
BRCA1-211ENST00000472490 ZMAT5Q9UDW3 170 aaKnown RBP10.99□□□□□ -0.65
BRCA1-211ENST00000472490 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 TMEM56-RWDD3S4R434 201 aa10.99□□□□□ -0.65
BRCA1-211ENST00000472490 OR2J3O76001 311 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 IGLL1P15814 213 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 PRCDQ00LT1 54 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 TATDN3Q17R31 274 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 C15orf32Q32M92 178 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 LGI3Q8N145 548 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 CENPSQ8N2Z9 138 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 OR10W1Q8NGF6 305 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 TMEM230Q96A57 120 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 CXorf58Q96LI9 332 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 ALX4Q9H161 411 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-211ENST00000472490 PEF1Q9UBV8 284 aaKnown RBP10.98□□□□□ -0.65
BRCA1-211ENST00000472490 KLK9Q9UKQ9 250 aa10.98□□□□□ -0.65
BRCA1-211ENST00000472490 LINC00854A0A1B0GVQ3 168 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 G3V4G9 280 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 NDUFB6O95139 128 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 IFNA17P01571 189 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 REG1AP05451 166 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 P0C879 139 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 VAMP1P23763 118 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 UBE2MP61081 183 aaKnown RBP10.97□□□□□ -0.65
BRCA1-211ENST00000472490 ERHP84090 104 aaKnown RBP10.97□□□□□ -0.65
BRCA1-211ENST00000472490 EXOSC2Q13868 293 aaKnown RBP10.97□□□□□ -0.65
BRCA1-211ENST00000472490 TMEM187Q14656 261 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 SELENOHQ8IZQ5 122 aaKnown RBP10.97□□□□□ -0.65
BRCA1-211ENST00000472490 EEF1AKMT3Q96AZ1 226 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 FANCD2OSQ96PS1 177 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 PLEKHA3Q9HB20 300 aa10.97□□□□□ -0.65
BRCA1-211ENST00000472490 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-211ENST00000472490 IGLV11-55A0A075B6I3 123 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 IGHV4OR15-8A0A075B7B6 117 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 A0A087WW49 117 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 TRBV7-1A0A0A6YYK4 115 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 A0A0B4J293 547 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 A0A0B4J2A0 478 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 ANKRD34BA5PLL1 514 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 DBX1A6NMT0 343 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 OVOL1O14753 267 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms