RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CTRB1P17538 263 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 SAMD5Q5TGI4 173 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 CTRB2Q6GPI1 263 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 OR4A16Q8NH70 328 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 GLYATL2Q8WU03 294 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 DPF1Q92782 380 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 MCRIP2Q9BUT9 160 aaKnown RBP11.83□□□□□ -0.52
SDC3-203ENST00000471567 AKIP1Q9NQ31 210 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 NDUFA4L2Q9NRX3 87 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
SDC3-203ENST00000471567 IGLC7A0M8Q6 106 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 IGKV1-5P01602 117 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 IGHV3-11P01762 117 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 HSPB1P04792 205 aaKnown RBP11.82□□□□□ -0.52
SDC3-203ENST00000471567 P0C879 139 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 IL7P13232 177 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 HIST1H1BP16401 226 aaKnown RBP11.82□□□□□ -0.52
SDC3-203ENST00000471567 AKR1C2P52895 323 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 RHOGP84095 191 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 FAM219AQ8IW50 185 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 NECAP1Q8NC96 275 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 S100ZQ8WXG8 99 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 TMEM230Q96A57 120 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 C7orf50Q9BRJ6 194 aaKnown RBP11.82□□□□□ -0.52
SDC3-203ENST00000471567 GPR61Q9BZJ8 451 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 PTTG2Q9NZH5 202 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 CMYA5Q8N3K9 4069 aa11.82□□□□□ -0.52
SDC3-203ENST00000471567 CENPXA8MT69 81 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 LINC01619G3V211 115 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 G3V4G9 280 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 PRH1P02810 166 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 IGLL1P15814 213 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 AKR1C4P17516 323 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 FAM209BQ5JX69 171 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 ZNF343Q6P1L6 599 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 ZNF429Q86V71 674 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 RBPMSQ93062 196 aaKnown RBP11.81□□□□□ -0.52
SDC3-203ENST00000471567 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 LSM10Q969L4 123 aaKnown RBP11.81□□□□□ -0.52
SDC3-203ENST00000471567 RRNAD1Q96FB5 475 aaKnown RBP11.81□□□□□ -0.52
SDC3-203ENST00000471567 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 ALX4Q9H161 411 aaPredicted RBP11.81□□□□□ -0.52
SDC3-203ENST00000471567 RANGRFQ9HD47 186 aaPredicted RBP11.81□□□□□ -0.52
SDC3-203ENST00000471567 TMEM56-RWDD3S4R434 201 aa11.81□□□□□ -0.52
SDC3-203ENST00000471567 DBX1A6NMT0 343 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 RBMXL2O75526 392 aaKnown RBP11.8□□□□□ -0.52
SDC3-203ENST00000471567 OR13C7P0DN81 318 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 ANXA3P12429 323 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 DEFA4P12838 97 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 RAB25P57735 213 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 HSPE1P61604 102 aaKnown RBP11.8□□□□□ -0.52
SDC3-203ENST00000471567 TMEM187Q14656 261 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
SDC3-203ENST00000471567 TMEM128Q5BJH2 165 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 OXLD1Q5BKU9 147 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 KPRPQ5T749 579 aaPredicted RBP11.8□□□□□ -0.52
SDC3-203ENST00000471567 SELENOHQ8IZQ5 122 aaKnown RBP11.8□□□□□ -0.52
SDC3-203ENST00000471567 OR10W1Q8NGF6 305 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 FANCD2OSQ96PS1 177 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 CCDC32Q9BV29 185 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 HINT2Q9BX68 163 aa11.8□□□□□ -0.52
SDC3-203ENST00000471567 IGHV4OR15-8A0A075B7B6 117 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 A0A087WW49 117 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 A0A0B4J293 547 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 CYB5BO43169 146 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 OR2J3O76001 311 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 REG1AP05451 166 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 SUPT4H1P63272 117 aaKnown RBP11.79□□□□□ -0.52
SDC3-203ENST00000471567 SRPXP78539 464 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 WT1-ASQ06250 92 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 TMED4Q7Z7H5 227 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 RNASE11Q8TAA1 199 aaKnown RBP11.79□□□□□ -0.52
SDC3-203ENST00000471567 LHFPL5Q8TAF8 219 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
SDC3-203ENST00000471567 FBXL7Q9UJT9 491 aa11.79□□□□□ -0.52
SDC3-203ENST00000471567 NOTCH1P46531 2555 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 IGLV11-55A0A075B6I3 123 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 NDUFB6O95139 128 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 ZP3P21754 424 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 PRCDQ00LT1 54 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 DEFA5Q01523 94 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 EXOSC2Q13868 293 aaKnown RBP11.78□□□□□ -0.52
SDC3-203ENST00000471567 IZUMO4Q1ZYL8 232 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 C15orf32Q32M92 178 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 TMEM268Q5VZI3 342 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 C19orf35Q6ZS72 473 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 C1QL4Q86Z23 238 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 OR1L6Q8NGR2 347 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 THYN1Q9P016 225 aa11.78□□□□□ -0.52
SDC3-203ENST00000471567 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
SDC3-203ENST00000471567 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
SDC3-203ENST00000471567 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.53
SDC3-203ENST00000471567 ANKRD34BA5PLL1 514 aa11.77□□□□□ -0.53
SDC3-203ENST00000471567 NDUFB8O95169 186 aa11.77□□□□□ -0.53
SDC3-203ENST00000471567 MECP2P51608 486 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms