RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 ZNF506Q5JVG8 444 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 MBNL2Q5VZF2 373 aaKnown RBP7.79□□□□□ -1.16
TOP3A-203ENST00000469739 LHX4Q969G2 390 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 IL22RA2Q969J5 263 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 LSM10Q969L4 123 aaKnown RBP7.79□□□□□ -1.16
TOP3A-203ENST00000469739 PATZ1Q9HBE1 687 aaKnown RBP7.79□□□□□ -1.16
TOP3A-203ENST00000469739 FKBP11Q9NYL4 201 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 GAB2Q9UQC2 676 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 DUXBA0A1W2PPF3 345 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 A0A1W2PPQ1 181 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 RNF212BA8MTL3 300 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 CCL3L1P16619 93 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 MSMO1Q15800 293 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 ACSM6Q6P461 480 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 ZNF66Q6ZN08 573 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 Q8TCH9 128 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 RPUSD4Q96CM3 377 aaKnown RBP7.79□□□□□ -1.16
TOP3A-203ENST00000469739 ELOVL1Q9BW60 279 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 CALYQ9NYX4 217 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 CELSR1Q9NYQ6 3014 aa7.79□□□□□ -1.16
TOP3A-203ENST00000469739 SERTM2A0A1B0GWG4 89 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 HPRT1P00492 218 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 MMP9P14780 707 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 RPP25LQ8N5L8 163 aaKnown RBP7.78□□□□□ -1.16
TOP3A-203ENST00000469739 NECAP1Q8NC96 275 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 TAF15Q92804 592 aaKnown RBP eCLIP7.78□□□□□ -1.16
TOP3A-203ENST00000469739 ACY3Q96HD9 319 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 TRAV38-1A0A0B4J264 116 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 TRGV8A0A0C4DH27 118 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 MAP1LC3B2A6NCE7 125 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 DPRXA6NFQ7 191 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 NPIPB11E5RHQ5 1161 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 PPP5D1E7EU14 171 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 IGHV3-48P01763 117 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 IL6RP08887 468 aaPredicted RBP7.78□□□□□ -1.16
TOP3A-203ENST00000469739 DUTP33316 252 aaKnown RBP7.78□□□□□ -1.16
TOP3A-203ENST00000469739 PNRC1Q12796 327 aaPredicted RBP7.78□□□□□ -1.16
TOP3A-203ENST00000469739 RTP5Q14D33 572 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 SPACA3Q8IXA5 215 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 OR10P1Q8NGE3 313 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 OR4A16Q8NH70 328 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 SSMEM1Q8WWF3 244 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 MAP1LC3BQ9GZQ8 125 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 WDR61Q9GZS3 305 aaKnown RBP7.78□□□□□ -1.16
TOP3A-203ENST00000469739 SLC35D1Q9NTN3 355 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 ZFP30Q9Y2G7 519 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 ACACBO00763 2458 aa7.78□□□□□ -1.16
TOP3A-203ENST00000469739 RRHO14718 337 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 MGST3O14880 152 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 APELAP0DMC3 54 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 HNF1AP20823 631 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 PDLIM4P50479 330 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 CT45A1Q5HYN5 189 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 FFAR4Q5NUL3 377 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 C11orf42Q8N5U0 333 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 RNF152Q8N8N0 203 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 CLDND2Q8NHS1 167 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 CT45A3Q8NHU0 189 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 FAM57AQ8TBR7 257 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 NAGKQ9UJ70 344 aa7.77□□□□□ -1.16
TOP3A-203ENST00000469739 HRNRQ86YZ3 2850 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-203ENST00000469739 ZNF705FA8MVS1 300 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-203ENST00000469739 C16orf97H3BN30 126 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 ZNF705DP0CH99 300 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-203ENST00000469739 ZNF705BP0CI00 300 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-203ENST00000469739 OR10J1P30954 320 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 CDKN1BP46527 198 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 Q8NA96 180 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 S1PR3Q99500 378 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 RNF7Q9UBF6 113 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 MYO18BQ8IUG5 2567 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 SAA2-SAA4A0A096LPE2 208 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 SAA2P0DJI9 122 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-203ENST00000469739 GZMHP20718 246 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 TFPI2P48307 235 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 LRRC75BQ2VPJ9 315 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 CT83Q5H943 113 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 IGFL3Q6UXB1 125 aa7.77□□□□□ -1.17
TOP3A-203ENST00000469739 C20orf202A1L168 122 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 FAM90A27PA6NNH2 459 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 LY6HO94772 140 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
TOP3A-203ENST00000469739 COL5A1-AS1Q5SY13 56 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 WDR25Q64LD2 544 aaPredicted RBP7.76□□□□□ -1.17
TOP3A-203ENST00000469739 LEMD1Q68G75 181 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 MOB3BQ86TA1 216 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 LINC01560Q8TB33 94 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 IGFBPL1Q8WX77 278 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 TMEM37Q8WXS4 190 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 MIEN1Q9BRT3 115 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 HSPB7Q9UBY9 170 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 LAMP3Q9UQV4 416 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 IGKV1-16P04430 117 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 LOXL3P58215 753 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 TMEM108Q6UXF1 575 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 ZNF709Q8N972 641 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 OR10G4Q8NGN3 311 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 OR10G9Q8NGN4 311 aa7.76□□□□□ -1.17
TOP3A-203ENST00000469739 OR10G7Q8NGN6 311 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms