RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RBPMSQ93062 196 aaKnown RBP8.56□□□□□ -1.04
MSH5-212ENST00000467319 IL22RA2Q969J5 263 aa8.56□□□□□ -1.04
MSH5-212ENST00000467319 FYTTD1Q96QD9 318 aaKnown RBP8.56□□□□□ -1.04
MSH5-212ENST00000467319 NDUFA4L2Q9NRX3 87 aa8.56□□□□□ -1.04
MSH5-212ENST00000467319 NSG2Q9Y328 171 aa8.56□□□□□ -1.04
MSH5-212ENST00000467319 A0A0B4J293 547 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 TEX50A0A1B0GTY4 177 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 CCL24O00175 119 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 SNAPC5O75971 98 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 ATG12O94817 140 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 PF4P02776 101 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 PSMB6P28072 239 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 MYCNOSP40205 109 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 DEFA5Q01523 94 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 DHODHQ02127 395 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 WT1-ASQ06250 92 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 IZUMO4Q1ZYL8 232 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 HSD17B13Q7Z5P4 300 aaPredicted RBP8.55□□□□□ -1.04
MSH5-212ENST00000467319 ZNF429Q86V71 674 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 SLC25A42Q86VD7 318 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 FAM219AQ8IW50 185 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 SGPP2Q8IWX5 399 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 SELENOHQ8IZQ5 122 aaKnown RBP8.55□□□□□ -1.04
MSH5-212ENST00000467319 OR1L8Q8NGR8 309 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 MS4A10Q96PG2 267 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 FANCD2OSQ96PS1 177 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 WDR12Q9GZL7 423 aaKnown RBP8.55□□□□□ -1.04
MSH5-212ENST00000467319 COA4Q9NYJ1 87 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 OR51B2Q9Y5P1 312 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 DMRT1Q9Y5R6 373 aa8.55□□□□□ -1.04
MSH5-212ENST00000467319 IGLV11-55A0A075B6I3 123 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 LINC00854A0A1B0GVQ3 168 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 LYRM1O43325 122 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 PRH1P02810 166 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 TRAPPC2P0DI81 140 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 TRAPPC2BP0DI82 140 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 AKR1C4P17516 323 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 UBE2MP61081 183 aaKnown RBP8.54□□□□□ -1.04
MSH5-212ENST00000467319 SRPXP78539 464 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 RHOGP84095 191 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 ZNF846Q147U1 533 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 TMEM128Q5BJH2 165 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 NMSQ5H8A3 153 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 TMEM268Q5VZI3 342 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 TMED4Q7Z7H5 227 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 CENPSQ8N2Z9 138 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 OR10W1Q8NGF6 305 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 LSM10Q969L4 123 aaKnown RBP8.54□□□□□ -1.04
MSH5-212ENST00000467319 USMG5Q96IX5 58 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 DUX3Q96PT4 197 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 ALX4Q9H161 411 aaPredicted RBP8.54□□□□□ -1.04
MSH5-212ENST00000467319 FKBP11Q9NYL4 201 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 TBC1D24Q9ULP9 559 aa8.54□□□□□ -1.04
MSH5-212ENST00000467319 A0A0B4J2A0 478 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 A0A0G2JLM5 398 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 CENPXA8MT69 81 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 UPK1BO75841 260 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 REG1AP05451 166 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 PRCDQ00LT1 54 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 ZNF616Q08AN1 781 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 ASAH1Q13510 395 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 PPP1R1AQ13522 171 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 ANKRD55Q3KP44 614 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 PDLIM3Q53GG5 364 aaPredicted RBP8.53□□□□□ -1.04
MSH5-212ENST00000467319 SAMD5Q5TGI4 173 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 ZNF343Q6P1L6 599 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 Q6ZRM9 215 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 SLC35G3Q8N808 338 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 LRTM2Q8N967 370 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 ZNF114Q8NC26 417 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 NECAP1Q8NC96 275 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 OR4A16Q8NH70 328 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 RRNAD1Q96FB5 475 aaKnown RBP8.53□□□□□ -1.04
MSH5-212ENST00000467319 OR5B12Q96R08 314 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 SHPKQ9UHJ6 478 aa8.53□□□□□ -1.04
MSH5-212ENST00000467319 IGHV4OR15-8A0A075B7B6 117 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 A0A087WW49 117 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 DUXBA0A1W2PPF3 345 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 ST8SIA3O43173 380 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 DHFRP00374 187 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 IGHV3-11P01762 117 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 ANXA3P12429 323 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 HSPE1P61604 102 aaKnown RBP8.52□□□□□ -1.05
MSH5-212ENST00000467319 IFITM3Q01628 133 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 EXOSC2Q13868 293 aaKnown RBP8.52□□□□□ -1.05
MSH5-212ENST00000467319 KPRPQ5T749 579 aaPredicted RBP8.52□□□□□ -1.05
MSH5-212ENST00000467319 OR11H1Q8NG94 326 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 C20orf85Q9H1P6 137 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 ZNF355PQ9NSJ1 428 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 FLVCR2Q9UPI3 526 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 KCNIP3Q9Y2W7 256 aa8.52□□□□□ -1.05
MSH5-212ENST00000467319 C13orf42A0A1B0GVH6 325 aa8.51□□□□□ -1.05
MSH5-212ENST00000467319 WIPF1O43516 503 aa8.51□□□□□ -1.05
MSH5-212ENST00000467319 OR2J3O76001 311 aa8.51□□□□□ -1.05
MSH5-212ENST00000467319 SFT2D2O95562 160 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms