RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 FAM212BQ9NTI7 297 aaPredicted RBP9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 PRNDQ9UKY0 176 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 S4R3C0 116 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 IGHV4OR15-8A0A075B7B6 117 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 A0A087WW49 117 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 CRYM-AS1A6NIL9 109 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 ATG12O94817 140 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 PRB2P02812 416 aaPredicted RBP9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 OR13C7P0DN81 318 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 IL7P13232 177 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 DEFA6Q01524 100 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 TMEM268Q5VZI3 342 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 TMEM230Q96A57 120 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 TSC22D3Q99576 134 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 TMEM222Q9H0R3 208 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 FBXL7Q9UJT9 491 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 ZNF257Q9Y2Q1 563 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
SHROOM3-202ENST00000466541 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 CENPXA8MT69 81 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 LINC01619G3V211 115 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 DHFRP00374 187 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 HSPB1P04792 205 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 OR8U8P0C7N1 319 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 VAMP1P23763 118 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 UCP1P25874 307 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 HOXD3P31249 432 aaPredicted RBP9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 RUNX1Q01196 453 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 DHODHQ02127 395 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 EXOSC2Q13868 293 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 C15orf32Q32M92 178 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 SELENOHQ8IZQ5 122 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 WFDC9Q8NEX5 89 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 LHFPL5Q8TAF8 219 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 GLYATL2Q8WU03 294 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 DCUN1D4Q92564 292 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 USMG5Q96IX5 58 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 NDUFA4L2Q9NRX3 87 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 FKBP11Q9NYL4 201 aa9.3□□□□□ -0.92
SHROOM3-202ENST00000466541 C15orf61A6NNL5 157 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 NDUFB8O95169 186 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 IFNA17P01571 189 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 TRBV12-3P01733 135 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 CTRB1P17538 263 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 WT1-ASQ06250 92 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 CTRB2Q6GPI1 263 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 NECAP1Q8NC96 275 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 RBPMSQ93062 196 aaKnown RBP9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 LSM10Q969L4 123 aaKnown RBP9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 RCC1LQ96I51 464 aaKnown RBP9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 BATF3Q9NR55 127 aa9.29□□□□□ -0.92
SHROOM3-202ENST00000466541 TRBV9A0A0B4J1U6 114 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 IGHV3-21A0A0B4J1V1 117 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 A0A0B4J293 547 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 A0A0G2JRQ6 117 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 NAP1L6A6NFF2 107 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 SEC14L6B5MCN3 397 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 B3GALNT1O75752 331 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 NXPH3O95157 252 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 CDS2O95674 445 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 CRYGCP07315 174 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 ANXA3P12429 323 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 SUPT4H1P63272 117 aaKnown RBP9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 TMEM187Q14656 261 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 SAMD5Q5TGI4 173 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 SLC35G3Q8N808 338 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 OR5B3Q8NH48 314 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 SLC25A21Q9BQT8 299 aaPredicted RBP9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 PDCD10Q9BUL8 212 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 RANGRFQ9HD47 186 aaPredicted RBP9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 PTTG2Q9NZH5 202 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 PEF1Q9UBV8 284 aaKnown RBP9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 FLVCR2Q9UPI3 526 aa9.28□□□□□ -0.92
SHROOM3-202ENST00000466541 PPP5D1E7EU14 171 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 OVOL1O14753 267 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 P0C879 139 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 HIST1H1BP16401 226 aaKnown RBP9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 HSPE1P61604 102 aaKnown RBP9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 FHL3Q13643 280 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 RBMS2Q15434 407 aaKnown RBP9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 BEAN1Q3B7T3 259 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 THOC7Q6I9Y2 204 aaKnown RBP9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 ZNF343Q6P1L6 599 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 Q6ZRM9 215 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 LYZL2Q7Z4W2 148 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 CENPSQ8N2Z9 138 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 DEDD2Q8WXF8 326 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 S100ZQ8WXG8 99 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 GPR146Q96CH1 333 aa9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 MCRIP2Q9BUT9 160 aaKnown RBP9.27□□□□□ -0.93
SHROOM3-202ENST00000466541 PLEKHA3Q9HB20 300 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms