RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
CXCR4-203ENST00000466288 SPRY2O43597 315 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 NAPSAO96009 420 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 RHOGP84095 191 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 CDK10Q15131 360 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 Q6ZWC4 215 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 NOXA1Q86UR1 476 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 TMEM61Q8N0U2 210 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 GIMAP1Q8WWP7 306 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 FAAP24Q9BTP7 215 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 OR1A1Q9P1Q5 309 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 HSF4Q9ULV5 492 aa10.76□□□□□ -0.69
CXCR4-203ENST00000466288 FAM223BA6NKX1 122 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 APOA2P02652 100 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 PRH1P02810 166 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 CD3DP04234 171 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 ANXA3P12429 323 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 CEACAM6P40199 344 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 GNG2P59768 71 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 OR10K2Q6IF99 312 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 FAM223AQ8IWN6 122 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 OR52B4Q8NGK2 314 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 EDARADDQ8WWZ3 215 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 CACNG8Q8WXS5 425 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 ZNF486Q96H40 463 aaPredicted RBP10.75□□□□□ -0.69
CXCR4-203ENST00000466288 HYLS1Q96M11 299 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 KCNK15Q9H427 330 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 IFT46Q9NQC8 304 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 HSPG2P98160 4391 aa10.75□□□□□ -0.69
CXCR4-203ENST00000466288 TRBV9A0A0B4J1U6 114 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 TMEM235A6NFC5 223 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 FOXI3A8MTJ6 420 aaPredicted RBP10.74□□□□□ -0.69
CXCR4-203ENST00000466288 LGALS9O00182 355 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 MFNGO00587 321 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 CREBL2O60519 120 aaPredicted RBP10.74□□□□□ -0.69
CXCR4-203ENST00000466288 HLA-AP01891 365 aaKnown RBP10.74□□□□□ -0.69
CXCR4-203ENST00000466288 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 SULT1A3P0DMM9 295 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 SULT1A4P0DMN0 295 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 CBLN1P23435 193 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 RNASE10Q5GAN6 216 aaKnown RBP10.74□□□□□ -0.69
CXCR4-203ENST00000466288 C6orf201Q7Z4U5 140 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 SCGB3A2Q96PL1 93 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 GINS4Q9BRT9 223 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 SLC35D1Q9NTN3 355 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 SRRM4A7MD48 611 aaKnown RBP10.74□□□□□ -0.69
CXCR4-203ENST00000466288 PPP5D1E7EU14 171 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 PTHLHP12272 177 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 CBX3Q13185 183 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 DEFB135Q30KP9 77 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 ARRDC1Q8N5I2 433 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 PHB2Q99623 299 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 MLXQ9UH92 298 aa10.74□□□□□ -0.69
CXCR4-203ENST00000466288 SSNA1O43805 119 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 TUSC2O75896 110 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 OR2C1O95371 312 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 MED14OSP0DP75 135 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 ZBTB25P24278 435 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 TMEM50BP56557 158 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 TAS2R46P59540 309 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 MRPS15P82914 257 aaKnown RBP10.73□□□□□ -0.69
CXCR4-203ENST00000466288 TM4SF20Q53R12 229 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 MOB1BQ7L9L4 216 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 TMEM17Q86X19 198 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 TMEM217Q8N7C4 229 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 OR51S1Q8NGJ8 323 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 HARBI1Q96MB7 349 aa10.73□□□□□ -0.69
CXCR4-203ENST00000466288 CHMP1AQ9HD42 196 aaPredicted RBP10.73□□□□□ -0.69
CXCR4-203ENST00000466288 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
CXCR4-203ENST00000466288 M0R1X1 148 aa10.72□□□□□ -0.69
CXCR4-203ENST00000466288 GGCTO75223 188 aaKnown RBP10.72□□□□□ -0.69
CXCR4-203ENST00000466288 SCAF4O95104 1147 aaKnown RBP10.72□□□□□ -0.69
CXCR4-203ENST00000466288 ZNF735P0CB33 412 aa10.72□□□□□ -0.69
CXCR4-203ENST00000466288 APOC4P55056 127 aa10.72□□□□□ -0.69
CXCR4-203ENST00000466288 UBE2MP61081 183 aaKnown RBP10.72□□□□□ -0.69
CXCR4-203ENST00000466288 FCN2Q15485 313 aa10.72□□□□□ -0.69
CXCR4-203ENST00000466288 ANKRD55Q3KP44 614 aa10.72□□□□□ -0.69
CXCR4-203ENST00000466288 RNF183Q96D59 192 aa10.72□□□□□ -0.69
CXCR4-203ENST00000466288 A0A0A6YYD4 124 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 TRBV6-6A0A0A6YYG2 114 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 A0A1B0GVY2 172 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 SOCS1O15524 211 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 FCER2P06734 321 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 GNB3P16520 340 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 DTYMKP23919 212 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 HLA-DRB3P79483 266 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 ARFRP1Q13795 201 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 C15orf32Q32M92 178 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 TMEM177Q53S58 311 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 PLAC9Q5JTB6 97 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 IDO2Q6ZQW0 420 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 HOGA1Q86XE5 327 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 GPHB5Q86YW7 130 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 NECAP1Q8NC96 275 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 SRSF12Q8WXF0 261 aaKnown RBP10.71□□□□□ -0.69
CXCR4-203ENST00000466288 FYTTD1Q96QD9 318 aaKnown RBP10.71□□□□□ -0.69
CXCR4-203ENST00000466288 PECRQ9BY49 303 aa10.71□□□□□ -0.69
CXCR4-203ENST00000466288 KCNK7Q9Y2U2 307 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms