RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 PSG5Q15238 335 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 VMA21Q3ZAQ7 101 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 LGALSLQ3ZCW2 172 aaPredicted RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 CXorf66Q5JRM2 361 aaPredicted RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 KLF17Q5JT82 389 aaPredicted RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 OR4A47Q6IF82 309 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 C16orf82Q7Z2V1 217 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 LHFPL4Q7Z7J7 247 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 MOB3BQ86TA1 216 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 ZNF546Q86UE3 836 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 MMD2Q8IY49 270 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 KCNRGQ8N5I3 272 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 WFDC11Q8NEX6 87 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 OR1S1Q8NH92 325 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 NANPQ8TBE9 248 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 HARBI1Q96MB7 349 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 AQP10Q96PS8 301 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 CHIAQ9BZP6 476 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 TMEM14BQ9NUH8 114 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 GSKIPQ9P0R6 139 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 CACNG5Q9UF02 275 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 ITGB1BP2Q9UKP3 347 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 NUP50Q9UKX7 468 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 TNFSF18Q9UNG2 199 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 CR1P17927 2039 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.37□□□□□ -1.711e-8■■□□□ 14.4
VPS41-211ENST00000466017 A0A1W2PN81 502 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 H7C2Y5 167 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 RRHO14718 337 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 TIMM23O14925 209 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 FGF16O43320 207 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 CD5LO43866 347 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 CHST1O43916 411 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 TSC22D2O75157 780 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 FBP1P09467 338 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 FAM106CPP0CH98 169 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 CHRNA7P36544 502 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 VDAC2P45880 294 aaPredicted RBP4.36□□□□□ -1.71
VPS41-211ENST00000466017 REG1BP48304 166 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 EIF2B2P49770 351 aaKnown RBP4.36□□□□□ -1.71
VPS41-211ENST00000466017 DLX1P56177 255 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 POLR2GP62487 172 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS41-211ENST00000466017 RPL23AP62750 156 aaKnown RBP4.36□□□□□ -1.71
VPS41-211ENST00000466017 RPP30P78346 268 aaKnown RBP4.36□□□□□ -1.71
VPS41-211ENST00000466017 TNFRSF9Q07011 255 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 BAXQ07812 192 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 SSX2Q16385 188 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 MRGPRG-AS1Q2M3A8 158 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 KLK9Q2XQG4 91 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 PVRIGQ6DKI7 326 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 LAMTOR1Q6IAA8 161 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 ZNF562Q6V9R5 426 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 SPNS3Q6ZMD2 512 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 HSD17B13Q7Z5P4 300 aaPredicted RBP4.36□□□□□ -1.71
VPS41-211ENST00000466017 PPP1R27Q86WC6 154 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 DYNAPQ8N1N2 210 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 STPG2Q8N412 459 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 C9orf62Q8N4C0 152 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 OR1L8Q8NGR8 309 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 OR4A16Q8NH70 328 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 RNASE11Q8TAA1 199 aaKnown RBP4.36□□□□□ -1.71
VPS41-211ENST00000466017 PIFOQ8TCI5 191 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 GON7Q9BXV9 100 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 MFFQ9GZY8 342 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 SLC25A31Q9H0C2 315 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 NDUFA4L2Q9NRX3 87 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 PLSCR3Q9NRY6 295 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 PITPNC1Q9UKF7 332 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 SIGLEC9Q9Y336 463 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 HILPDAQ9Y5L2 63 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 U3KQ87 197 aa4.36□□□□□ -1.71
VPS41-211ENST00000466017 HELZ2Q9BYK8 2649 aaKnown RBP4.36□□□□□ -1.71
VPS41-211ENST00000466017 TRAV3A0A0B4J244 114 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 TRAV40A0A0B4J280 105 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 TEX50A0A1B0GTY4 177 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 SMLR1H3BR10 107 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 BOLA2-SMG1P6H3BVE0 249 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 M0QZK8 103 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 WRBO00258 174 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 NBR2O15453 112 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 SAA1P0DJI8 122 aaPredicted RBP4.35□□□□□ -1.71
VPS41-211ENST00000466017 IGHV4-38-2P0DP08 117 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 CXCL2P19875 107 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 S100A11P31949 105 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 NUP62P37198 522 aaPredicted RBP4.35□□□□□ -1.71
VPS41-211ENST00000466017 RPL8P62917 257 aaKnown RBP4.35□□□□□ -1.71
VPS41-211ENST00000466017 BLOC1S1P78537 153 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 PRCDQ00LT1 54 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 PRSS8Q16651 343 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 ATP6V1FQ16864 119 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 C5orf64Q2M2E5 130 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 BSXQ3C1V8 233 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 OR2B11Q5JQS5 317 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 KHDC1LQ5JSQ8 128 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 TMEM14EPQ6UXP3 125 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 OR2C3Q8N628 320 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 TMEM252Q8N6L7 170 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 INO80EQ8NBZ0 244 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms