RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ATG12O94817 140 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 PSMB6P28072 239 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 CCR6P51684 374 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 TMEM187Q14656 261 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 RBMS2Q15434 407 aaKnown RBP15.73■□□□□ 0.11
SKA3-205ENST00000465471 OR1L8Q8NGR8 309 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 DUX3Q96PT4 197 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 FKBP11Q9NYL4 201 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 OR51B2Q9Y5P1 312 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 NOTCH1P46531 2555 aa15.73■□□□□ 0.11
SKA3-205ENST00000465471 PLA2G10O15496 165 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 NDUFB6O95139 128 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 TRAPPC2P0DI81 140 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 TRAPPC2BP0DI82 140 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 AKR1C2P52895 323 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 C19orf35Q6ZS72 473 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 HSD17B13Q7Z5P4 300 aaPredicted RBP15.72■□□□□ 0.11
SKA3-205ENST00000465471 ZNF429Q86V71 674 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 SELENOHQ8IZQ5 122 aaKnown RBP15.72■□□□□ 0.11
SKA3-205ENST00000465471 RBPMSQ93062 196 aaKnown RBP15.72■□□□□ 0.11
SKA3-205ENST00000465471 IL22RA2Q969J5 263 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 USMG5Q96IX5 58 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 OR5B12Q96R08 314 aa15.72■□□□□ 0.11
SKA3-205ENST00000465471 ALX4Q9H161 411 aaPredicted RBP15.72■□□□□ 0.11
SKA3-205ENST00000465471 NOTCH3Q9UM47 2321 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 A0A0B4J293 547 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 A0A0G2JLM5 398 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 A0A0G2JRQ6 117 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 FAM223BA6NKX1 122 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 PRH1P02810 166 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 AKR1C4P17516 323 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 DEFA5Q01523 94 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 WT1-ASQ06250 92 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 IZUMO4Q1ZYL8 232 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 TMEM128Q5BJH2 165 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 FAM219AQ8IW50 185 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 FAM223AQ8IWN6 122 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 OR11H1Q8NG94 326 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 OR10W1Q8NGF6 305 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 FANCD2OSQ96PS1 177 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 KCNIP3Q9Y2W7 256 aa15.71■□□□□ 0.11
SKA3-205ENST00000465471 LINC00854A0A1B0GVQ3 168 aa15.7■□□□□ 0.1
SKA3-205ENST00000465471 CENPXA8MT69 81 aa15.7■□□□□ 0.1
SKA3-205ENST00000465471 IGHV3-11P01762 117 aa15.7■□□□□ 0.1
SKA3-205ENST00000465471 RHOGP84095 191 aa15.7■□□□□ 0.1
SKA3-205ENST00000465471 AARDQ4LEZ3 155 aa15.7■□□□□ 0.1
SKA3-205ENST00000465471 TMED4Q7Z7H5 227 aa15.7■□□□□ 0.1
SKA3-205ENST00000465471 OR4A16Q8NH70 328 aa15.7■□□□□ 0.1
SKA3-205ENST00000465471 LSM10Q969L4 123 aaKnown RBP15.7■□□□□ 0.1
SKA3-205ENST00000465471 C13orf42A0A1B0GVH6 325 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 REG1AP05451 166 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 CD33P20138 364 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 ZNF616Q08AN1 781 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 SAMD5Q5TGI4 173 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 TMEM268Q5VZI3 342 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 ZNF343Q6P1L6 599 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 NECAP1Q8NC96 275 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 OR1N2Q8NGR9 330 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 RRNAD1Q96FB5 475 aaKnown RBP15.69■□□□□ 0.1
SKA3-205ENST00000465471 WDR12Q9GZL7 423 aaKnown RBP15.69■□□□□ 0.1
SKA3-205ENST00000465471 PRR13Q9NZ81 148 aa15.69■□□□□ 0.1
SKA3-205ENST00000465471 MEGF8Q7Z7M0 2845 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 IGLV11-55A0A075B6I3 123 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 LYRM1O43325 122 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 DHFRP00374 187 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 UBE2MP61081 183 aaKnown RBP15.68■□□□□ 0.1
SKA3-205ENST00000465471 HSPE1P61604 102 aaKnown RBP15.68■□□□□ 0.1
SKA3-205ENST00000465471 PRCDQ00LT1 54 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 ZNF846Q147U1 533 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 Q6ZRM9 215 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 CENPSQ8N2Z9 138 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 DMRT1Q9Y5R6 373 aa15.68■□□□□ 0.1
SKA3-205ENST00000465471 IGHV4OR15-8A0A075B7B6 117 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 A0A087WW49 117 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 LINC01619G3V211 115 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 OR2J3O76001 311 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 HSPB1P04792 205 aaKnown RBP15.67■□□□□ 0.1
SKA3-205ENST00000465471 OR8U8P0C7N1 319 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 ANXA3P12429 323 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 HIST1H1BP16401 226 aaKnown RBP15.67■□□□□ 0.1
SKA3-205ENST00000465471 SRPXP78539 464 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 SLC35G3Q8N808 338 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 RCC1LQ96I51 464 aaKnown RBP15.67■□□□□ 0.1
SKA3-205ENST00000465471 DNAH3Q8TD57 4116 aa15.67■□□□□ 0.1
SKA3-205ENST00000465471 A0A0B4J2A0 478 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 INS-IGF2F8WCM5 200 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 G3V4G9 280 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 ST8SIA3O43173 380 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 OR13C7P0DN81 318 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 PPP1R1AQ13522 171 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 C15orf32Q32M92 178 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 NMSQ5H8A3 153 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 KPRPQ5T749 579 aaPredicted RBP15.66■□□□□ 0.1
SKA3-205ENST00000465471 LRTM2Q8N967 370 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 GPR146Q96CH1 333 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 HINT2Q9BX68 163 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 SHPKQ9UHJ6 478 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 TBC1D24Q9ULP9 559 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 FLVCR2Q9UPI3 526 aa15.66■□□□□ 0.1
SKA3-205ENST00000465471 NDUFB8O95169 186 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms