RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 VWFP04275 2813 aa9□□□□□ -0.97
CUX1-207ENST00000465461 A0A0B4J293 547 aa9□□□□□ -0.97
CUX1-207ENST00000465461 C15orf61A6NNL5 157 aa9□□□□□ -0.97
CUX1-207ENST00000465461 NPIPB5A8MRT5 1133 aa9□□□□□ -0.97
CUX1-207ENST00000465461 PLA2G10O15496 165 aa9□□□□□ -0.97
CUX1-207ENST00000465461 NDUFB8O95169 186 aa9□□□□□ -0.97
CUX1-207ENST00000465461 CDS2O95674 445 aa9□□□□□ -0.97
CUX1-207ENST00000465461 TRBV12-3P01733 135 aa9□□□□□ -0.97
CUX1-207ENST00000465461 PRB2P02812 416 aaPredicted RBP9□□□□□ -0.97
CUX1-207ENST00000465461 CRYGCP07315 174 aa9□□□□□ -0.97
CUX1-207ENST00000465461 P0C879 139 aa9□□□□□ -0.97
CUX1-207ENST00000465461 OR13C7P0DN81 318 aa9□□□□□ -0.97
CUX1-207ENST00000465461 CTRB1P17538 263 aa9□□□□□ -0.97
CUX1-207ENST00000465461 SLC6A1P30531 599 aa9□□□□□ -0.97
CUX1-207ENST00000465461 BTCP35070 178 aa9□□□□□ -0.97
CUX1-207ENST00000465461 RUNX1Q01196 453 aa9□□□□□ -0.97
CUX1-207ENST00000465461 WT1-ASQ06250 92 aa9□□□□□ -0.97
CUX1-207ENST00000465461 TMEM187Q14656 261 aa9□□□□□ -0.97
CUX1-207ENST00000465461 SAMD5Q5TGI4 173 aa9□□□□□ -0.97
CUX1-207ENST00000465461 TMEM268Q5VZI3 342 aa9□□□□□ -0.97
CUX1-207ENST00000465461 CTRB2Q6GPI1 263 aa9□□□□□ -0.97
CUX1-207ENST00000465461 Q6ZRM9 215 aa9□□□□□ -0.97
CUX1-207ENST00000465461 SGPP2Q8IWX5 399 aa9□□□□□ -0.97
CUX1-207ENST00000465461 OR1L8Q8NGR8 309 aa9□□□□□ -0.97
CUX1-207ENST00000465461 RNASE11Q8TAA1 199 aaKnown RBP9□□□□□ -0.97
CUX1-207ENST00000465461 DPF1Q92782 380 aa9□□□□□ -0.97
CUX1-207ENST00000465461 SCGB3A2Q96PL1 93 aa9□□□□□ -0.97
CUX1-207ENST00000465461 FANCD2OSQ96PS1 177 aa9□□□□□ -0.97
CUX1-207ENST00000465461 NDUFA4L2Q9NRX3 87 aa9□□□□□ -0.97
CUX1-207ENST00000465461 TMEM14BQ9NUH8 114 aa9□□□□□ -0.97
CUX1-207ENST00000465461 PTTG2Q9NZH5 202 aa9□□□□□ -0.97
CUX1-207ENST00000465461 FBXL7Q9UJT9 491 aa9□□□□□ -0.97
CUX1-207ENST00000465461 PRNDQ9UKY0 176 aa9□□□□□ -0.97
CUX1-207ENST00000465461 ZNF257Q9Y2Q1 563 aa9□□□□□ -0.97
CUX1-207ENST00000465461 DMRT1Q9Y5R6 373 aa9□□□□□ -0.97
CUX1-207ENST00000465461 PKD1L1Q8TDX9 2849 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 TRBV9A0A0B4J1U6 114 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 LINC01619G3V211 115 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 HSPB1P04792 205 aaKnown RBP8.99□□□□□ -0.97
CUX1-207ENST00000465461 DEFA4P12838 97 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 MECP2P51608 486 aaKnown RBP8.99□□□□□ -0.97
CUX1-207ENST00000465461 DEFA6Q01524 100 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 DHODHQ02127 395 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 ATP5G2Q06055 141 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 ZNF616Q08AN1 781 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 FHL3Q13643 280 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 SLC25A42Q86VD7 318 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 DCUN1D4Q92564 292 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 DLX4Q92988 240 aaPredicted RBP8.99□□□□□ -0.97
CUX1-207ENST00000465461 GPR146Q96CH1 333 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 TSC22D3Q99576 134 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 KCNIP3Q9Y2W7 256 aa8.99□□□□□ -0.97
CUX1-207ENST00000465461 MGAM2Q2M2H8 2515 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 IGHV3-21A0A0B4J1V1 117 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 A0A0G2JLM5 398 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 NAP1L6A6NFF2 107 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 ST8SIA3O43173 380 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 NXPH3O95157 252 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 BRI3O95415 125 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 HOXD3P31249 432 aaPredicted RBP8.98□□□□□ -0.97
CUX1-207ENST00000465461 MFAP2P55001 183 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 EXOSC2Q13868 293 aaKnown RBP8.98□□□□□ -0.97
CUX1-207ENST00000465461 C15orf32Q32M92 178 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 ZNF343Q6P1L6 599 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 CADM3Q8N126 398 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 SLC35G3Q8N808 338 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 DEDD2Q8WXF8 326 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 RBPMSQ93062 196 aaKnown RBP8.98□□□□□ -0.97
CUX1-207ENST00000465461 LSM10Q969L4 123 aaKnown RBP8.98□□□□□ -0.97
CUX1-207ENST00000465461 RRNAD1Q96FB5 475 aaKnown RBP8.98□□□□□ -0.97
CUX1-207ENST00000465461 SLC25A21Q9BQT8 299 aaPredicted RBP8.98□□□□□ -0.97
CUX1-207ENST00000465461 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
CUX1-207ENST00000465461 FBN3Q75N90 2809 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 IGLV11-55A0A075B6I3 123 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 FAM223BA6NKX1 122 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 PPP5D1E7EU14 171 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 B3GALNT1O75752 331 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 ATG12O94817 140 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 NDUFB6O95139 128 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 FGF2P09038 288 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 OR8U8P0C7N1 319 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 VAMP1P23763 118 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 HSPE1P61604 102 aaKnown RBP8.97□□□□□ -0.97
CUX1-207ENST00000465461 PPP1R1AQ13522 171 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 RBMS2Q15434 407 aaKnown RBP8.97□□□□□ -0.97
CUX1-207ENST00000465461 BEAN1Q3B7T3 259 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 ANKRD55Q3KP44 614 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 C11orf87Q6NUJ2 197 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 SLC25A24Q6NUK1 477 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 LYZL2Q7Z4W2 148 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 FAM223AQ8IWN6 122 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 CENPSQ8N2Z9 138 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 NECAP1Q8NC96 275 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 OR5B3Q8NH48 314 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 S100ZQ8WXG8 99 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 GALNT14Q96FL9 552 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 RCC1LQ96I51 464 aaKnown RBP8.97□□□□□ -0.97
CUX1-207ENST00000465461 USMG5Q96IX5 58 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 TMEM56Q96MV1 263 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 ZC4H2Q9NQZ6 224 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms