RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 RRNAD1Q96FB5 475 aaKnown RBP11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 GALNT14Q96FL9 552 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 C7orf50Q9BRJ6 194 aaKnown RBP11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 CCDC32Q9BV29 185 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 NDUFA4L2Q9NRX3 87 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
SQSTM1-205ENST00000464493 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 DBX1A6NMT0 343 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 RBMXL2O75526 392 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 DHFRP00374 187 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 LGALS1P09382 135 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 P0C879 139 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 CTRB1P17538 263 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 RBMS2Q15434 407 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 CTRB2Q6GPI1 263 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 HSD17B13Q7Z5P4 300 aaPredicted RBP11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 SELENOHQ8IZQ5 122 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 OR10W1Q8NGF6 305 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 OR5B3Q8NH48 314 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 RBPMSQ93062 196 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 USMG5Q96IX5 58 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM56Q96MV1 263 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 HINT2Q9BX68 163 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 ALX4Q9H161 411 aaPredicted RBP11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM56-RWDD3S4R434 201 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 NOTCH3Q9UM47 2321 aa11.24□□□□□ -0.61
SQSTM1-205ENST00000464493 TRBV9A0A0B4J1U6 114 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 REG1AP05451 166 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 ANXA3P12429 323 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 DEFA4P12838 97 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 RAB25P57735 213 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 SUPT4H1P63272 117 aaKnown RBP11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 RHOGP84095 191 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM187Q14656 261 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 IZUMO4Q1ZYL8 232 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM128Q5BJH2 165 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 TMEM268Q5VZI3 342 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 NECAP1Q8NC96 275 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 LHFPL5Q8TAF8 219 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 DPF1Q92782 380 aa11.23□□□□□ -0.61
SQSTM1-205ENST00000464493 A0A0B4J293 547 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 PLA2G10O15496 165 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 OR2J3O76001 311 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 NDUFB6O95139 128 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 HSPB1P04792 205 aaKnown RBP11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 OR13C7P0DN81 318 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 NOTCH1P46531 2555 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 DEFA5Q01523 94 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 ATP5G2Q06055 141 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 WT1-ASQ06250 92 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 FHL3Q13643 280 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 ZNF846Q147U1 533 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 C19orf35Q6ZS72 473 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 ZNF429Q86V71 674 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 FAM219AQ8IW50 185 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 IL22RA2Q969J5 263 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 LSM10Q969L4 123 aaKnown RBP11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 WDR12Q9GZL7 423 aaKnown RBP11.22□□□□□ -0.61
SQSTM1-205ENST00000464493 A0A0G2JRQ6 117 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 LINC01619G3V211 115 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 LYRM1O43325 122 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 OR8U8P0C7N1 319 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 HIST1H1BP16401 226 aaKnown RBP11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 BTCP35070 178 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 KLK9Q2XQG4 91 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 RCC1LQ96I51 464 aaKnown RBP11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 RANGRFQ9HD47 186 aaPredicted RBP11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 PRR13Q9NZ81 148 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 FBXL7Q9UJT9 491 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.61
SQSTM1-205ENST00000464493 IGHV4OR15-8A0A075B7B6 117 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 A0A087WW49 117 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 ANKRD34BA5PLL1 514 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 G3V4G9 280 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 IGLL1P15814 213 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 VAMP1P23763 118 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 SRPXP78539 464 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 C15orf32Q32M92 178 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 OXLD1Q5BKU9 147 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 Q6ZRM9 215 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 LGI3Q8N145 548 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 GPR146Q96CH1 333 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 PDCD10Q9BUL8 212 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 FLVCR2Q9UPI3 526 aa11.2□□□□□ -0.62
SQSTM1-205ENST00000464493 IGLV11-55A0A075B6I3 123 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 A0A0B4J2A0 478 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms