RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ALX4Q9H161 411 aaPredicted RBP16.84■□□□□ 0.29
SSNA1-202ENST00000459860 NSG2Q9Y328 171 aa16.84■□□□□ 0.29
SSNA1-202ENST00000459860 A6NHS1 94 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 CRYM-AS1A6NIL9 109 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 C15orf61A6NNL5 157 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 CYB5BO43169 146 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 OR5AC1P0C628 307 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 AREGP15514 252 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 RHOGP84095 191 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 DHODHQ02127 395 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 SP6Q3SY56 376 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 OR5B3Q8NH48 314 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 RRNAD1Q96FB5 475 aaKnown RBP16.83■□□□□ 0.28
SSNA1-202ENST00000459860 KCNIP3Q9Y2W7 256 aa16.83■□□□□ 0.28
SSNA1-202ENST00000459860 DNAH3Q8TD57 4116 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 TEX50A0A1B0GTY4 177 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 A0A1B0GW64 132 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 PRH1P02810 166 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 HSPB1P04792 205 aaKnown RBP16.82■□□□□ 0.28
SSNA1-202ENST00000459860 HIST1H1BP16401 226 aaKnown RBP16.82■□□□□ 0.28
SSNA1-202ENST00000459860 DEFA5Q01523 94 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 KPRPQ5T749 579 aaPredicted RBP16.82■□□□□ 0.28
SSNA1-202ENST00000459860 NECAP1Q8NC96 275 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 LSM10Q969L4 123 aaKnown RBP16.82■□□□□ 0.28
SSNA1-202ENST00000459860 TMEM56Q96MV1 263 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 TMEM222Q9H0R3 208 aa16.82■□□□□ 0.28
SSNA1-202ENST00000459860 CGB1A6NKQ9 187 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 REG1AP05451 166 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 CRYGCP07315 174 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 CTRB1P17538 263 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 MECP2P51608 486 aaKnown RBP16.81■□□□□ 0.28
SSNA1-202ENST00000459860 ATP5G2Q06055 141 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 BAK1Q16611 211 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 CNPY1Q3B7I2 92 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 CTRB2Q6GPI1 263 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 SLC25A21Q9BQT8 299 aaPredicted RBP16.81■□□□□ 0.28
SSNA1-202ENST00000459860 RANGRFQ9HD47 186 aaPredicted RBP16.81■□□□□ 0.28
SSNA1-202ENST00000459860 AKIP1Q9NQ31 210 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 BATF3Q9NR55 127 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 TMEM14BQ9NUH8 114 aa16.81■□□□□ 0.28
SSNA1-202ENST00000459860 IGHV4OR15-8A0A075B7B6 117 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 A0A087WW49 117 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 TRBV9A0A0B4J1U6 114 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 IGLC7A0M8Q6 106 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 NAP1L6A6NFF2 107 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 CENPXA8MT69 81 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 OR2J3O76001 311 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 ANXA3P12429 323 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 AKR1C4P17516 323 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 EXOSC2Q13868 293 aaKnown RBP16.8■□□□□ 0.28
SSNA1-202ENST00000459860 LINC00299Q6ZSB3 139 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 NDUFA4L2Q9NRX3 87 aa16.8■□□□□ 0.28
SSNA1-202ENST00000459860 ANKRD34BA5PLL1 514 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 IGKV1-5P01602 117 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 ZP3P21754 424 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 FAM209BQ5JX69 171 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 ZNF343Q6P1L6 599 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 TMED4Q7Z7H5 227 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 OR10W1Q8NGF6 305 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 RBPMSQ93062 196 aaKnown RBP16.79■□□□□ 0.28
SSNA1-202ENST00000459860 PDCD10Q9BUL8 212 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 THYN1Q9P016 225 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 FBXL7Q9UJT9 491 aa16.79■□□□□ 0.28
SSNA1-202ENST00000459860 CDS2O95674 445 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 OR13C7P0DN81 318 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 IL7P13232 177 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 SLURP1P55000 103 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 RBMS2Q15434 407 aaKnown RBP16.78■□□□□ 0.28
SSNA1-202ENST00000459860 C15orf32Q32M92 178 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 C19orf35Q6ZS72 473 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 FAM219AQ8IW50 185 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 GLYATL2Q8WU03 294 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 GALNT14Q96FL9 552 aa16.78■□□□□ 0.28
SSNA1-202ENST00000459860 C7orf50Q9BRJ6 194 aaKnown RBP16.78■□□□□ 0.28
SSNA1-202ENST00000459860 PEF1Q9UBV8 284 aaKnown RBP16.78■□□□□ 0.28
SSNA1-202ENST00000459860 PIGBOS1A0A0B4J2F0 54 aa16.77■□□□□ 0.28
SSNA1-202ENST00000459860 OVOL1O14753 267 aa16.77■□□□□ 0.28
SSNA1-202ENST00000459860 C9orf66Q5T8R8 295 aa16.77■□□□□ 0.28
SSNA1-202ENST00000459860 TMEM268Q5VZI3 342 aa16.77■□□□□ 0.28
SSNA1-202ENST00000459860 TMEM230Q96A57 120 aa16.77■□□□□ 0.28
SSNA1-202ENST00000459860 SDHCQ99643 169 aaPredicted RBP16.77■□□□□ 0.28
SSNA1-202ENST00000459860 PTTG2Q9NZH5 202 aa16.77■□□□□ 0.28
SSNA1-202ENST00000459860 LINC00854A0A1B0GVQ3 168 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 DBX1A6NMT0 343 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 SEC14L6B5MCN3 397 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 SRPXP78539 464 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 PRCDQ00LT1 54 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 WT1-ASQ06250 92 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 ZNF429Q86V71 674 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 S100ZQ8WXG8 99 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 DCUN1D4Q92564 292 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 IL22RA2Q969J5 263 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 EEF1AKMT3Q96AZ1 226 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 FANCD2OSQ96PS1 177 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 PLEKHA3Q9HB20 300 aa16.76■□□□□ 0.27
SSNA1-202ENST00000459860 IGLV11-55A0A075B6I3 123 aa16.75■□□□□ 0.27
SSNA1-202ENST00000459860 PRB2P02812 416 aaPredicted RBP16.75■□□□□ 0.27
SSNA1-202ENST00000459860 P0C879 139 aa16.75■□□□□ 0.27
SSNA1-202ENST00000459860 HOXD3P31249 432 aaPredicted RBP16.75■□□□□ 0.27
SSNA1-202ENST00000459860 HSPE1P61604 102 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms