RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 PPP1R1AQ13522 171 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 BATFQ16520 125 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 AAED1Q7RTV5 226 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 TMEM161BQ8NDZ6 487 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 C11orf40Q8WZ69 217 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 KCTD7Q96MP8 289 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 MAST2Q6P0Q8 1798 aa0.34□□□□□ -2.36
SCARNA18-201ENST00000459004 TECTAO75443 2155 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 LOC110117498A0A087WWA1 95 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 C19orf84I3L1E1 186 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 REG1AP05451 166 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 CD151P48509 253 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 EIF2B2P49770 351 aaKnown RBP0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 SUPT4H1P63272 117 aaKnown RBP0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 UBE2IP63279 158 aaKnown RBP0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 CAV1Q03135 178 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 CST9Q5W186 159 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 ZNF550Q7Z398 422 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 GPR32P1Q8NGA4 272 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 DNAJB3Q8WWF6 145 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 LINC00526Q96FQ7 95 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 OBSCN-AS1Q96MR7 158 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 IL36BQ9NZH7 164 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 TTC21AQ8NDW8 1320 aa0.33□□□□□ -2.36
SCARNA18-201ENST00000459004 C1orf232A0A0U1RR37 186 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 FABP12A6NFH5 140 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 SSNA1O43805 119 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 OR5F1O95221 314 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 KCNE1P15382 129 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 RPS4Y1P22090 263 aaKnown RBP0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 SYPL2Q5VXT5 272 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 GLT8D1Q68CQ7 371 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 ZNF826PQ6ZT77 177 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 C10orf67Q8IYJ2 551 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 WFDC11Q8NEX6 87 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 C7orf50Q9BRJ6 194 aaKnown RBP0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 C15orf41Q9Y2V0 281 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 ANAPC1Q9H1A4 1944 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 ARFGEF3Q5TH69 2177 aa0.32□□□□□ -2.36
SCARNA18-201ENST00000459004 FABP5P3A8MUU1 101 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 COCHO43405 550 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 TYMSP04818 313 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 FAM228BP0C875 321 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 BRS3P32247 399 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 STX5Q13190 355 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 RSU1Q15404 277 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 IBA57Q5T440 356 aaKnown RBP0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 PLEKHG7Q6ZR37 379 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 COMMD7Q86VX2 200 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 C1orf158Q8N1D5 194 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 LINC00471Q8N535 108 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 DIRAS2Q96HU8 199 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 EFCAB1Q9HAE3 211 aa0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 MUC5BQ9HC84 5762 aaPredicted RBP0.31□□□□□ -2.36
SCARNA18-201ENST00000459004 DIDO1Q9BTC0 2240 aaKnown RBP0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 EXPH5Q8NEV8 1989 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 GOLGA8KD6RF30 607 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 PFDN6O15212 129 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 CALUO43852 315 aaPredicted RBP0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 PRM2P04554 102 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 MAP2K4P45985 399 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 MAP3K7CLP57077 242 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 LCN15Q6UWW0 184 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 OR4D11Q8NGI4 311 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 TMEM106AQ96A25 262 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 HDHD2Q9H0R4 259 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 MAP1LC3AQ9H492 121 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 FAM96AQ9H5X1 160 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 IMP3Q9NV31 184 aaKnown RBP0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 PLEKHJ1Q9NW61 149 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 KLK9Q9UKQ9 250 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 AHNAK2Q8IVF2 5795 aa0.3□□□□□ -2.36
SCARNA18-201ENST00000459004 FADS1O60427 444 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 HYPMO75409 117 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 C8orf88P0DMB2 117 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 UCHL3P15374 230 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 MYL12AP19105 171 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 RPL12P30050 165 aaKnown RBP0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 UBE2G2P60604 165 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 CCL20P78556 96 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 DEFB128Q7Z7B8 93 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 DEFB125Q8N687 156 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 RASSF5Q8WWW0 418 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 CMTM5Q96DZ9 223 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 CNBD2Q96M20 576 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 SLC50A1Q9BRV3 221 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 CKLFQ9UBR5 152 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 ZFP30Q9Y2G7 519 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 GPR98Q8WXG9 6306 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 ABCC11Q96J66 1382 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 DCCP43146 1447 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 RALGAPA2Q2PPJ7 1873 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 CCDC88AQ3V6T2 1871 aa0.29□□□□□ -2.36
SCARNA18-201ENST00000459004 IGKV1D-42A0A075B6H8 117 aa0.28□□□□□ -2.36
SCARNA18-201ENST00000459004 FAM25EA8MYX2 175 aa0.28□□□□□ -2.36
SCARNA18-201ENST00000459004 GOLGA6L19H0YKK7 550 aa0.28□□□□□ -2.36
SCARNA18-201ENST00000459004 HTR1AP08908 422 aa0.28□□□□□ -2.36
SCARNA18-201ENST00000459004 FKBP2P26885 142 aaKnown RBP0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms