RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 AKR1C2P52895 323 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 IZUMO4Q1ZYL8 232 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 TMEM128Q5BJH2 165 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 THOC7Q6I9Y2 204 aaKnown RBP21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 OR5B3Q8NH48 314 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 OR4A16Q8NH70 328 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 RBPMSQ93062 196 aaKnown RBP21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 P2RX4Q99571 388 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 MGAM2Q2M2H8 2515 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 TRBV9A0A0B4J1U6 114 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 CCL24O00175 119 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 CTRB1P17538 263 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 PSMB6P28072 239 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 DEFB136Q30KP8 78 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 CTRB2Q6GPI1 263 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 WFDC9Q8NEX5 89 aa21.69■■□□□ 1.06
SMARCC1-203ENST00000454240 LYRM1O43325 122 aa21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 RBMXL2O75526 392 aaKnown RBP21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 PRH1P02810 166 aa21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 CENPSQ8N2Z9 138 aa21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 OR10W1Q8NGF6 305 aa21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 IL22RA2Q969J5 263 aa21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 RRNAD1Q96FB5 475 aaKnown RBP21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 DUX3Q96PT4 197 aa21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 OR5B12Q96R08 314 aa21.68■■□□□ 1.06
SMARCC1-203ENST00000454240 A0A0B4J293 547 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 A0A0G2JLM5 398 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 A0A0G2JRQ6 117 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 LGALS1P09382 135 aaKnown RBP21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 KLK9Q2XQG4 91 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 TMEM268Q5VZI3 342 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 HSD17B13Q7Z5P4 300 aaPredicted RBP21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 ZNF429Q86V71 674 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 FAM219AQ8IW50 185 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 MRPL41Q8IXM3 137 aaKnown RBP21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 LINC00482Q8N8I6 264 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 PRR13Q9NZ81 148 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 KLK9Q9UKQ9 250 aa21.67■■□□□ 1.06
SMARCC1-203ENST00000454240 IGHV3-11P01762 117 aa21.66■■□□□ 1.06
SMARCC1-203ENST00000454240 REG1AP05451 166 aa21.66■■□□□ 1.06
SMARCC1-203ENST00000454240 ANXA3P12429 323 aa21.66■■□□□ 1.06
SMARCC1-203ENST00000454240 C19orf35Q6ZS72 473 aa21.66■■□□□ 1.06
SMARCC1-203ENST00000454240 OR11H1Q8NG94 326 aa21.66■■□□□ 1.06
SMARCC1-203ENST00000454240 USMG5Q96IX5 58 aa21.66■■□□□ 1.06
SMARCC1-203ENST00000454240 ALX4Q9H161 411 aaPredicted RBP21.66■■□□□ 1.06
SMARCC1-203ENST00000454240 HSPE1P61604 102 aaKnown RBP21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 DEFA5Q01523 94 aa21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 WT1-ASQ06250 92 aa21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 FHL3Q13643 280 aa21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 LSM10Q969L4 123 aaKnown RBP21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 FANCD2OSQ96PS1 177 aa21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 HINT2Q9BX68 163 aa21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 FLVCR2Q9UPI3 526 aa21.65■■□□□ 1.06
SMARCC1-203ENST00000454240 C13orf42A0A1B0GVH6 325 aa21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 FAM223BA6NKX1 122 aa21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 DHFRP00374 187 aa21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 UBE2MP61081 183 aaKnown RBP21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 RHOGP84095 191 aa21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 Q6ZRM9 215 aa21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 FAM223AQ8IWN6 122 aa21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 NECAP1Q8NC96 275 aa21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 RNASE11Q8TAA1 199 aaKnown RBP21.64■■□□□ 1.05
SMARCC1-203ENST00000454240 UPK1BO75841 260 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 OR13C7P0DN81 318 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 SRPXP78539 464 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 PPP1R1AQ13522 171 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 LGI3Q8N145 548 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 SLC35G3Q8N808 338 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 OR1N2Q8NGR9 330 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 GPR146Q96CH1 333 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 NBEAL1Q6ZS30 2694 aa21.63■■□□□ 1.05
SMARCC1-203ENST00000454240 A0A0B4J2A0 478 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 SFT2D2O95562 160 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 CD33P20138 364 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 VAMP1P23763 118 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 PRCDQ00LT1 54 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 ZNF616Q08AN1 781 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 SHPKQ9UHJ6 478 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 TBC1D24Q9ULP9 559 aa21.62■■□□□ 1.05
SMARCC1-203ENST00000454240 ST8SIA3O43173 380 aa21.61■■□□□ 1.05
SMARCC1-203ENST00000454240 OR2J3O76001 311 aa21.61■■□□□ 1.05
SMARCC1-203ENST00000454240 DEFA4P12838 97 aa21.61■■□□□ 1.05
SMARCC1-203ENST00000454240 HIST1H1BP16401 226 aaKnown RBP21.61■■□□□ 1.05
SMARCC1-203ENST00000454240 AARDQ4LEZ3 155 aa21.61■■□□□ 1.05
SMARCC1-203ENST00000454240 ZNF343Q6P1L6 599 aa21.61■■□□□ 1.05
SMARCC1-203ENST00000454240 IGLV11-55A0A075B6I3 123 aa21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 HSPB1P04792 205 aaKnown RBP21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 ATP5G2Q06055 141 aa21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 ANKRD55Q3KP44 614 aa21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 LYZL2Q7Z4W2 148 aa21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 LRTM2Q8N967 370 aa21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 FBXL7Q9UJT9 491 aa21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 DMRT1Q9Y5R6 373 aa21.6■■□□□ 1.05
SMARCC1-203ENST00000454240 FBN3Q75N90 2809 aa21.59■■□□□ 1.05
SMARCC1-203ENST00000454240 IGHV4OR15-8A0A075B7B6 117 aa21.59■■□□□ 1.05
SMARCC1-203ENST00000454240 A0A087WW49 117 aa21.59■■□□□ 1.05
SMARCC1-203ENST00000454240 PIGBOS1A0A0B4J2F0 54 aa21.59■■□□□ 1.05
SMARCC1-203ENST00000454240 IFITM3Q01628 133 aa21.59■■□□□ 1.05
SMARCC1-203ENST00000454240 ASAH1Q13510 395 aa21.59■■□□□ 1.05
SMARCC1-203ENST00000454240 NMSQ5H8A3 153 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms