RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CTRB2Q6GPI1 263 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 THOC7Q6I9Y2 204 aaKnown RBP15.41■□□□□ 0.06
COL9A3-202ENST00000452372 REC114Q7Z4M0 266 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 GLYATL2Q8WU03 294 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 DPF1Q92782 380 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 TMEM222Q9H0R3 208 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 BATF3Q9NR55 127 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 IGLC7A0M8Q6 106 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 C15orf61A6NNL5 157 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 RBMXL2O75526 392 aaKnown RBP15.4■□□□□ 0.06
COL9A3-202ENST00000452372 DUS4LO95620 317 aaKnown RBP15.4■□□□□ 0.06
COL9A3-202ENST00000452372 CDS2O95674 445 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 IGKV1-5P01602 117 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 OR5AC1P0C628 307 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 OR8U8P0C7N1 319 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 INPP1P49441 399 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 DHODHQ02127 395 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 KLK9Q2XQG4 91 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 TMEM230Q96A57 120 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 AKIP1Q9NQ31 210 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 NDUFA4L2Q9NRX3 87 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 TMEM14BQ9NUH8 114 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 KLK9Q9UKQ9 250 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 OR51B2Q9Y5P1 312 aa15.4■□□□□ 0.06
COL9A3-202ENST00000452372 DNAH9Q9NYC9 4486 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 FAM223BA6NKX1 122 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 LINC01619G3V211 115 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 DHFRP00374 187 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 HSPB1P04792 205 aaKnown RBP15.39■□□□□ 0.05
COL9A3-202ENST00000452372 RAB25P57735 213 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 RHOGP84095 191 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 HSD17B13Q7Z5P4 300 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-202ENST00000452372 FAM223AQ8IWN6 122 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 SGPP2Q8IWX5 399 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 NECAP1Q8NC96 275 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 OR10W1Q8NGF6 305 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 OR5B3Q8NH48 314 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 OR4A16Q8NH70 328 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 GALNT14Q96FL9 552 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 SLC25A21Q9BQT8 299 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-202ENST00000452372 MCRIP2Q9BUT9 160 aaKnown RBP15.39■□□□□ 0.05
COL9A3-202ENST00000452372 AURKAIP1Q9NWT8 199 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-202ENST00000452372 KCNIP3Q9Y2W7 256 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 COL7A1Q02388 2944 aa15.39■□□□□ 0.05
COL9A3-202ENST00000452372 IGHV4OR15-8A0A075B7B6 117 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 A0A087WW49 117 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 NAP1L6A6NFF2 107 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 DBX1A6NMT0 343 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 REG1AP05451 166 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 P0C879 139 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 AKR1C2P52895 323 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 DEFA5Q01523 94 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 ZNF343Q6P1L6 599 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 C19orf35Q6ZS72 473 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 FANCD2OSQ96PS1 177 aa15.38■□□□□ 0.05
COL9A3-202ENST00000452372 RANGRFQ9HD47 186 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-202ENST00000452372 OR2J3O76001 311 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 IL7P13232 177 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 AKR1C4P17516 323 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 ATP5G2Q06055 141 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 IZUMO4Q1ZYL8 232 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 SELENOHQ8IZQ5 122 aaKnown RBP15.37■□□□□ 0.05
COL9A3-202ENST00000452372 MRAPQ8TCY5 172 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 TMEM56Q96MV1 263 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 HINT2Q9BX68 163 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 TMEM56-RWDD3S4R434 201 aa15.37■□□□□ 0.05
COL9A3-202ENST00000452372 A0A0B4J293 547 aa15.36■□□□□ 0.05
COL9A3-202ENST00000452372 OR13C7P0DN81 318 aa15.36■□□□□ 0.05
COL9A3-202ENST00000452372 DEFA4P12838 97 aa15.36■□□□□ 0.05
COL9A3-202ENST00000452372 HIST1H1BP16401 226 aaKnown RBP15.36■□□□□ 0.05
COL9A3-202ENST00000452372 HSPE1P61604 102 aaKnown RBP15.36■□□□□ 0.05
COL9A3-202ENST00000452372 WT1-ASQ06250 92 aa15.36■□□□□ 0.05
COL9A3-202ENST00000452372 ZNF429Q86V71 674 aa15.36■□□□□ 0.05
COL9A3-202ENST00000452372 LHFPL5Q8TAF8 219 aa15.36■□□□□ 0.05
COL9A3-202ENST00000452372 RBPMSQ93062 196 aaKnown RBP15.36■□□□□ 0.05
COL9A3-202ENST00000452372 LSM10Q969L4 123 aaKnown RBP15.36■□□□□ 0.05
COL9A3-202ENST00000452372 RRNAD1Q96FB5 475 aaKnown RBP15.36■□□□□ 0.05
COL9A3-202ENST00000452372 C7orf50Q9BRJ6 194 aaKnown RBP15.36■□□□□ 0.05
COL9A3-202ENST00000452372 GPR61Q9BZJ8 451 aa15.36■□□□□ 0.05
COL9A3-202ENST00000452372 IGLV11-55A0A075B6I3 123 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 ANKRD34BA5PLL1 514 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 CENPXA8MT69 81 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 SUPT4H1P63272 117 aaKnown RBP15.35■□□□□ 0.05
COL9A3-202ENST00000452372 TMEM187Q14656 261 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 C15orf32Q32M92 178 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 FAM219AQ8IW50 185 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 PTTG2Q9NZH5 202 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 PEF1Q9UBV8 284 aaKnown RBP15.35■□□□□ 0.05
COL9A3-202ENST00000452372 FBXL7Q9UJT9 491 aa15.35■□□□□ 0.05
COL9A3-202ENST00000452372 A0A0G2JRQ6 117 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 LINC00854A0A1B0GVQ3 168 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 NDUFB8O95169 186 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 CCR6P51684 374 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 SLURP1P55000 103 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 PRCDQ00LT1 54 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 RBMS2Q15434 407 aaKnown RBP15.34■□□□□ 0.05
COL9A3-202ENST00000452372 TMEM128Q5BJH2 165 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 TMEM268Q5VZI3 342 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 TMED4Q7Z7H5 227 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 RNASE11Q8TAA1 199 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms