RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CRYGSP22914 178 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 MEF2CQ06413 473 aaPredicted RBP7.16□□□□□ -1.26
LSM5-208ENST00000450169 TIGITQ495A1 244 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 CD300EQ496F6 205 aaPredicted RBP7.16□□□□□ -1.26
LSM5-208ENST00000450169 IBA57Q5T440 356 aaKnown RBP7.16□□□□□ -1.26
LSM5-208ENST00000450169 C9orf135Q5VTT2 229 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 TMEM251Q8N6I4 163 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 ZNF441Q8N8Z8 693 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 VSTM2AQ8TAG5 236 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 SERTAD4Q9NUC0 356 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 OR1A1Q9P1Q5 309 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 TRIOO75962 3097 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 VCANP13611 3396 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 SH2D7A6NKC9 451 aaPredicted RBP7.16□□□□□ -1.26
LSM5-208ENST00000450169 CA3P07451 260 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 FTH1P19P0C7X4 201 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 COX8AP10176 69 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 OPRK1P41145 380 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 FABP6P51161 128 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 FGF12P61328 243 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 RAB31Q13636 194 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 C10orf128Q5T292 105 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 CCDC144NLQ6NUI1 221 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 SLC23A3Q6PIS1 610 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 ZNF788Q6ZQV5 615 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 LINC00173Q6ZV60 143 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 POM121L2Q96KW2 1035 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.16□□□□□ -1.26
LSM5-208ENST00000450169 TSSC4Q9Y5U2 329 aaPredicted RBP7.16□□□□□ -1.26
LSM5-208ENST00000450169 SPAARA0A1B0GVQ0 90 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 A0A1W2PPM0 123 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 TMEM189A5PLL7 270 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 K7EQM0 130 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 MPDU1O75352 247 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 AGFG2O95081 481 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 LEPROTL1O95214 131 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 CA1P00915 261 aaPredicted RBP7.15□□□□□ -1.26
LSM5-208ENST00000450169 SP9P0CG40 484 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 G6PCP35575 357 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 PDLIM3Q53GG5 364 aaPredicted RBP7.15□□□□□ -1.26
LSM5-208ENST00000450169 C16orf47Q6ZP98 133 aaPredicted RBP7.15□□□□□ -1.26
LSM5-208ENST00000450169 TSTD1Q8NFU3 115 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 OR2Z1Q8NG97 314 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 URB1-AS1Q96HZ7 61 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 COL5A1P20908 1838 aaPredicted RBP7.15□□□□□ -1.26
LSM5-208ENST00000450169 KIAA1549Q9HCM3 1950 aa7.15□□□□□ -1.26
LSM5-208ENST00000450169 IGHV1-24A0A0C4DH33 117 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 hCG_38984A0A1B0GV85 526 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 C5orf67F2Z3F1 127 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.15□□□□□ -1.27
LSM5-208ENST00000450169 ZNF207O43670 478 aaKnown RBP7.15□□□□□ -1.27
LSM5-208ENST00000450169 GFRA3O60609 400 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 AREGP15514 252 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 MFAP2P55001 183 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 FOXE3Q13461 319 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 KIR3DS1Q14943 382 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 FAM162BQ5T6X4 162 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 WDR74Q6RFH5 385 aaPredicted RBP7.15□□□□□ -1.27
LSM5-208ENST00000450169 KCNIP1Q9NZI2 227 aa7.15□□□□□ -1.27
LSM5-208ENST00000450169 GON4LQ3T8J9 2241 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 KIR2DS5A0A0G2JLQ3 304 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 A0A0G2JNG1 304 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 KIR2DS3K7RE56 304 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 DHHO43323 396 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 SNAI2O43623 268 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 OR2J3O76001 311 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 ADH4P08319 380 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 LTBRP36941 435 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 HHEXQ03014 270 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 KIR2DS5Q14953 304 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 C5orf64Q2M2E5 130 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 SPINK9Q5DT21 86 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 GDF5OSQ5U4N7 250 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 MIC13Q5XKP0 118 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 TPRX1Q8N7U7 411 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.14□□□□□ -1.27
LSM5-208ENST00000450169 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 FER1L6-AS2Q96M78 137 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 SPATA25Q9BR10 227 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
LSM5-208ENST00000450169 MYO15AQ9UKN7 3530 aa7.14□□□□□ -1.27
LSM5-208ENST00000450169 TRBV6-6A0A0A6YYG2 114 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 ANKRD30BLA7E2S9 258 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 C15orf62A8K5M9 175 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 NPIPB11E5RHQ5 1161 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 SYNGR3O43761 229 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 RBMXL2O75526 392 aaKnown RBP7.13□□□□□ -1.27
LSM5-208ENST00000450169 P0C879 139 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 SLC25A53Q5H9E4 307 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 SPATA46Q5T0L3 261 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 FAM69BQ5VUD6 431 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 DRAM1Q8N682 238 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 STPG3Q8N7X2 389 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 H1FXQ92522 213 aaKnown RBP7.13□□□□□ -1.27
LSM5-208ENST00000450169 TMEM54Q969K7 222 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 GGTLC1Q9BX51 225 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 MAP1LC3CQ9BXW4 147 aa7.13□□□□□ -1.27
LSM5-208ENST00000450169 HILPDAQ9Y5L2 63 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms