RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ZNF257Q9Y2Q1 563 aa13.94□□□□□ -0.18
CPSF4-205ENST00000440514 TEX50A0A1B0GTY4 177 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 IGLC7A0M8Q6 106 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 CRYM-AS1A6NIL9 109 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 DBX1A6NMT0 343 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 C15orf61A6NNL5 157 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 IGKV1-5P01602 117 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 OR5AC1P0C628 307 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 ANXA3P12429 323 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 UCP1P25874 307 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 PSMB6P28072 239 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 DEFA6Q01524 100 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 H2BFWTQ7Z2G1 175 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 OR10W1Q8NGF6 305 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 DPF1Q92782 380 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 TMEM230Q96A57 120 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 HINT2Q9BX68 163 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 AKIP1Q9NQ31 210 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 OR51B2Q9Y5P1 312 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 MEGF8Q7Z7M0 2845 aa13.93□□□□□ -0.18
CPSF4-205ENST00000440514 NOTCH3Q9UM47 2321 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 A0A0G2JLM5 398 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 ANKRD34BA5PLL1 514 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 LINC01619G3V211 115 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 CYB5BO43169 146 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 OR2J3O76001 311 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 OR8U8P0C7N1 319 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 CTRB1P17538 263 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 AKR1C2P52895 323 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 SLURP1P55000 103 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 SRPXP78539 464 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 CTRB2Q6GPI1 263 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 WDR12Q9GZL7 423 aaKnown RBP13.92□□□□□ -0.18
CPSF4-205ENST00000440514 TMEM222Q9H0R3 208 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 PRNDQ9UKY0 176 aa13.92□□□□□ -0.18
CPSF4-205ENST00000440514 TRBV9A0A0B4J1U6 114 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 FAM223BA6NKX1 122 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 CRYGCP07315 174 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 TRAPPC2P0DI81 140 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 TRAPPC2BP0DI82 140 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 EXOSC2Q13868 293 aaKnown RBP13.91□□□□□ -0.18
CPSF4-205ENST00000440514 RBMS2Q15434 407 aaKnown RBP13.91□□□□□ -0.18
CPSF4-205ENST00000440514 FAM209BQ5JX69 171 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 KPRPQ5T749 579 aaPredicted RBP13.91□□□□□ -0.18
CPSF4-205ENST00000440514 FAM223AQ8IWN6 122 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 OR1L8Q8NGR8 309 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 LHFPL5Q8TAF8 219 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 PRR13Q9NZ81 148 aa13.91□□□□□ -0.18
CPSF4-205ENST00000440514 A0A0G2JRQ6 117 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 LINC00854A0A1B0GVQ3 168 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 TRBV12-3P01733 135 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 PRB2P02812 416 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-205ENST00000440514 HSPB1P04792 205 aaKnown RBP13.9□□□□□ -0.18
CPSF4-205ENST00000440514 P0C879 139 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 IL7P13232 177 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 AKR1C4P17516 323 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 WT1-ASQ06250 92 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 FAM219AQ8IW50 185 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 OR4A16Q8NH70 328 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 GLYATL2Q8WU03 294 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 DCUN1D4Q92564 292 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 RRNAD1Q96FB5 475 aaKnown RBP13.9□□□□□ -0.18
CPSF4-205ENST00000440514 USMG5Q96IX5 58 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 FANCD2OSQ96PS1 177 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 NDUFA4L2Q9NRX3 87 aa13.9□□□□□ -0.18
CPSF4-205ENST00000440514 DUS4LO95620 317 aaKnown RBP13.89□□□□□ -0.19
CPSF4-205ENST00000440514 OR13C7P0DN81 318 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 HOXD3P31249 432 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-205ENST00000440514 ATP5G2Q06055 141 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 C15orf32Q32M92 178 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 ZNF343Q6P1L6 599 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 TMED4Q7Z7H5 227 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 NECAP1Q8NC96 275 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 OR5B3Q8NH48 314 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 RNASE11Q8TAA1 199 aaKnown RBP13.89□□□□□ -0.19
CPSF4-205ENST00000440514 DLX4Q92988 240 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-205ENST00000440514 LSM10Q969L4 123 aaKnown RBP13.89□□□□□ -0.19
CPSF4-205ENST00000440514 GALNT14Q96FL9 552 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 FBXL7Q9UJT9 491 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 S4R3C0 116 aa13.89□□□□□ -0.19
CPSF4-205ENST00000440514 IGLV11-55A0A075B6I3 123 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 NDUFB8O95169 186 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 CDS2O95674 445 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 DEFA4P12838 97 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 MECP2P51608 486 aaKnown RBP13.88□□□□□ -0.19
CPSF4-205ENST00000440514 CCR6P51684 374 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 UBE2MP61081 183 aaKnown RBP13.88□□□□□ -0.19
CPSF4-205ENST00000440514 TMEM128Q5BJH2 165 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 SELENOHQ8IZQ5 122 aaKnown RBP13.88□□□□□ -0.19
CPSF4-205ENST00000440514 IL22RA2Q969J5 263 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 TMEM56Q96MV1 263 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 MCRIP2Q9BUT9 160 aaKnown RBP13.88□□□□□ -0.19
CPSF4-205ENST00000440514 DMRT1Q9Y5R6 373 aa13.88□□□□□ -0.19
CPSF4-205ENST00000440514 A0A0B4J293 547 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 SEC14L6B5MCN3 397 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 OVOL1O14753 267 aa13.87□□□□□ -0.19
CPSF4-205ENST00000440514 IGHV3-23P01764 117 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms