RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 KLF2Q9Y5W3 355 aaPredicted RBP12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A10PA6NDY2 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A18PA6NE21 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A16PA6NEW6 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A20PA6NIJ5 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A8PA6NJQ4 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A7PA6NKC0 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A22PA8MWA6 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A12PA8MX19 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A5PA8MXJ8 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A23PA8MXZ1 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 TMEM50AO95807 157 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A15PP0C7V4 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A13PP0C7W8 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A14PP0C7W9 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 FAM90A24PP0C7X0 464 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 GAB4Q2WGN9 574 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 GOSR1O95249 250 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 KHDC1LQ5JSQ8 128 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 CTHRC1Q96CG8 243 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 ITGB1BP1O14713 200 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 MOSP00540 346 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 CITED1Q99966 193 aa12.41□□□□□ -0.42
PCNX1-202ENST00000439984 GOLGB1Q14789 3259 aaKnown RBP12.41□□□□□ -0.42
PCNX1-202ENST00000439984 KBTBD11-OT1A0A1B0GTJ5 212 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 PEX7O00628 323 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 CACNG7P62955 275 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 PCSK4Q6UW60 755 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 OR4X2Q8NGF9 303 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 LINC00305Q7Z4B0 112 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 SARAFQ96BY9 339 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
PCNX1-202ENST00000439984 RAXQ9Y2V3 346 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 TRBV20OR9-2A0A075B6H5 130 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 TDGF1P13385 188 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 FCGR2BP31994 310 aaPredicted RBP12.4□□□□□ -0.42
PCNX1-202ENST00000439984 TIMP3P35625 211 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 AICDAQ9GZX7 198 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 C17orf98A8MV24 154 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 LRTM2Q8N967 370 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 NFAM1Q8NET5 270 aaPredicted RBP12.4□□□□□ -0.42
PCNX1-202ENST00000439984 NPIPB3Q92617 1050 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 LIFP15018 202 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 ANOS1P23352 680 aa12.4□□□□□ -0.42
PCNX1-202ENST00000439984 MEF2CQ06413 473 aaPredicted RBP12.4□□□□□ -0.42
PCNX1-202ENST00000439984 ZNF714Q96N38 554 aa12.4□□□□□ -0.43
PCNX1-202ENST00000439984 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.43
PCNX1-202ENST00000439984 TFF2Q03403 129 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 LOXL2Q9Y4K0 774 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 IGHMP01871 453 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 GNG5P63218 68 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 GAGE1Q13065 139 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 LINC01551Q86U37 167 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 A0A1W2PRE2 83 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 LOXL3P58215 753 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 LOC105371242A0A075B767 164 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 PPIAL4CA0A0B4J2A2 164 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 PPIAL4GP0DN37 164 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 RNASEH2CQ8TDP1 164 aaKnown RBP12.39□□□□□ -0.43
PCNX1-202ENST00000439984 NCOR1P1Q9H4R4 102 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 SBF1O95248 1867 aa12.39□□□□□ -0.43
PCNX1-202ENST00000439984 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
PCNX1-202ENST00000439984 PEAR1Q5VY43 1037 aaPredicted RBP12.38□□□□□ -0.43
PCNX1-202ENST00000439984 Q6ZVH6 145 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 FADS6Q8N9I5 356 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 MAGEA5P43359 124 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 HSD52Q0P140 79 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 ZNF658BQ4V348 819 aaPredicted RBP12.38□□□□□ -0.43
PCNX1-202ENST00000439984 C10orf91Q5T1B1 145 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 A0A1B0GUT8 65 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 STAG3L3P0CL85 134 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 WDR31Q8NA23 367 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 FOXL1Q12952 345 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 FAM90A2PQ658T7 463 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 TMEM171Q8WVE6 324 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 C20orf144Q9BQM9 153 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 MESP1Q9BRJ9 268 aa12.38□□□□□ -0.43
PCNX1-202ENST00000439984 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
PCNX1-202ENST00000439984 LYPD3O95274 346 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 ID3Q02535 119 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 SRSF4Q08170 494 aaKnown RBP12.37□□□□□ -0.43
PCNX1-202ENST00000439984 RPL39P5Q59GN2 51 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 LINC00114Q6XXX2 140 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 SIT1Q9Y3P8 196 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 SMIM10L1P0DMW3 83 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 DLX6P56179 175 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 PRSS8Q16651 343 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 SMIM10Q96HG1 83 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
PCNX1-202ENST00000439984 ZADH2Q8N4Q0 377 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 C5orf67F2Z3F1 127 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 LHX2P50458 406 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 IGKV1-9A0A0C4DH69 117 aa12.37□□□□□ -0.43
PCNX1-202ENST00000439984 CELA2AP08217 269 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms