RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 DUX3Q96PT4 197 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 OR5B12Q96R08 314 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 MCRIP2Q9BUT9 160 aaKnown RBP9.15□□□□□ -0.94
HSPG2-206ENST00000439717 GPR61Q9BZJ8 451 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 NDUFA4L2Q9NRX3 87 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 TMEM14BQ9NUH8 114 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 PTTG2Q9NZH5 202 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 KCNIP3Q9Y2W7 256 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 OR51B2Q9Y5P1 312 aa9.15□□□□□ -0.94
HSPG2-206ENST00000439717 TNCP24821 2201 aa9.15□□□□□ -0.95
HSPG2-206ENST00000439717 IGLC7A0M8Q6 106 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 CENPXA8MT69 81 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 LINC01619G3V211 115 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 IGKV1-5P01602 117 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 IGHV3-11P01762 117 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 HSPB1P04792 205 aaKnown RBP9.14□□□□□ -0.95
HSPG2-206ENST00000439717 P0C879 139 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 IL7P13232 177 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 AREGP15514 252 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 HIST1H1BP16401 226 aaKnown RBP9.14□□□□□ -0.95
HSPG2-206ENST00000439717 AKR1C2P52895 323 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 RHOGP84095 191 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 ZNF429Q86V71 674 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 FAM219AQ8IW50 185 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 GLYATL2Q8WU03 294 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 S100ZQ8WXG8 99 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 IL22RA2Q969J5 263 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 LSM10Q969L4 123 aaKnown RBP9.14□□□□□ -0.95
HSPG2-206ENST00000439717 TMEM230Q96A57 120 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 RRNAD1Q96FB5 475 aaKnown RBP9.14□□□□□ -0.95
HSPG2-206ENST00000439717 TMEM56Q96MV1 263 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 C7orf50Q9BRJ6 194 aaKnown RBP9.14□□□□□ -0.95
HSPG2-206ENST00000439717 AKIP1Q9NQ31 210 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 NSG2Q9Y328 171 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 TMEM56-RWDD3S4R434 201 aa9.14□□□□□ -0.95
HSPG2-206ENST00000439717 PIGBOS1A0A0B4J2F0 54 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 G3V4G9 280 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 CYB5BO43169 146 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 PRH1P02810 166 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 ANXA3P12429 323 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 DEFA4P12838 97 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 IGLL1P15814 213 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 AKR1C4P17516 323 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 RAB25P57735 213 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 ATP5G2Q06055 141 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 RBMS2Q15434 407 aaKnown RBP9.13□□□□□ -0.95
HSPG2-206ENST00000439717 FAM209BQ5JX69 171 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 KPRPQ5T749 579 aaPredicted RBP9.13□□□□□ -0.95
HSPG2-206ENST00000439717 ZNF343Q6P1L6 599 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 RNASE11Q8TAA1 199 aaKnown RBP9.13□□□□□ -0.95
HSPG2-206ENST00000439717 RBPMSQ93062 196 aaKnown RBP9.13□□□□□ -0.95
HSPG2-206ENST00000439717 FANCD2OSQ96PS1 177 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 CCDC32Q9BV29 185 aa9.13□□□□□ -0.95
HSPG2-206ENST00000439717 ALX4Q9H161 411 aaPredicted RBP9.13□□□□□ -0.95
HSPG2-206ENST00000439717 RANGRFQ9HD47 186 aaPredicted RBP9.13□□□□□ -0.95
HSPG2-206ENST00000439717 IGHV4OR15-8A0A075B7B6 117 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 A0A087WW49 117 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 A0A0B4J293 547 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 RBMXL2O75526 392 aaKnown RBP9.12□□□□□ -0.95
HSPG2-206ENST00000439717 OR2J3O76001 311 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 REG1AP05451 166 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 OR13C7P0DN81 318 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 HSPE1P61604 102 aaKnown RBP9.12□□□□□ -0.95
HSPG2-206ENST00000439717 SRPXP78539 464 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 WT1-ASQ06250 92 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 TMEM187Q14656 261 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 TMEM128Q5BJH2 165 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 OXLD1Q5BKU9 147 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 TMED4Q7Z7H5 227 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 SELENOHQ8IZQ5 122 aaKnown RBP9.12□□□□□ -0.95
HSPG2-206ENST00000439717 OR10W1Q8NGF6 305 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 LHFPL5Q8TAF8 219 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 HINT2Q9BX68 163 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 THYN1Q9P016 225 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 PEF1Q9UBV8 284 aaKnown RBP9.12□□□□□ -0.95
HSPG2-206ENST00000439717 FBXL7Q9UJT9 491 aa9.12□□□□□ -0.95
HSPG2-206ENST00000439717 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 NDUFB6O95139 128 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 ZP3P21754 424 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 MECP2P51608 486 aaKnown RBP9.11□□□□□ -0.95
HSPG2-206ENST00000439717 CCR6P51684 374 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 UBE2MP61081 183 aaKnown RBP9.11□□□□□ -0.95
HSPG2-206ENST00000439717 SUPT4H1P63272 117 aaKnown RBP9.11□□□□□ -0.95
HSPG2-206ENST00000439717 PRCDQ00LT1 54 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 DEFA5Q01523 94 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 EXOSC2Q13868 293 aaKnown RBP9.11□□□□□ -0.95
HSPG2-206ENST00000439717 C15orf32Q32M92 178 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 BEAN1Q3B7T3 259 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 TMEM268Q5VZI3 342 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 CENPSQ8N2Z9 138 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 OR1L6Q8NGR2 347 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 PDCD10Q9BUL8 212 aa9.11□□□□□ -0.95
HSPG2-206ENST00000439717 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.1□□□□□ -0.95
HSPG2-206ENST00000439717 A0A0B4J2A0 478 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 LINC00854A0A1B0GVQ3 168 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 ANKRD34BA5PLL1 514 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 INS-IGF2F8WCM5 200 aa9.1□□□□□ -0.95
HSPG2-206ENST00000439717 NDUFB8O95169 186 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms