RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 DEFA1P59665 94 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 DAD1P61803 113 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 PPP1CAP62136 330 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 PSG9Q00887 426 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 GNA12Q03113 381 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 IL15RAQ13261 267 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 RBMY1FQ15415 496 aaKnown RBP2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 Q499Y3 187 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 FAM74A1Q5RGS3 127 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 FAM201AQ5SY85 155 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 GLT8D1Q68CQ7 371 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 GUSBP11Q6P575 273 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 GLIPR1L1Q6UWM5 242 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 HRCT1Q6UXD1 115 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 ZCCHC24Q8N2G6 241 aaKnown RBP2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM86AQ8N2M4 240 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 DEFB125Q8N687 156 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 OR1L1Q8NH94 360 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 TWIST2Q8WVJ9 160 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 FRZBQ92765 325 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 GPR146Q96CH1 333 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 FMC1Q96HJ9 113 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 CAMK2N2Q96S95 79 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 MRPL57Q9BQC6 102 aaKnown RBP2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM70Q9BUB7 260 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 CHAC1Q9BUX1 264 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 OR8D2Q9GZM6 311 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 CHST6Q9GZX3 395 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 GTSF1LQ9H1H1 148 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 PRTFDC1Q9NRG1 225 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM216Q9P0N5 145 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF222Q9UK12 451 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 TET2Q6N021 2002 aaPredicted RBP2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 KIF13BQ9NQT8 1826 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 DNMT1P26358 1616 aaKnown RBP2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 NAIPQ13075 1403 aa2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 N4BP2Q86UW6 1770 aaPredicted RBP2.23□□□□□ -2.05
LSM1P1-201ENST00000438629 MYO10Q9HD67 2058 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ZSWIM8A7E2V4 1837 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 MYOM2P54296 1465 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 SCAF11Q99590 1463 aaKnown RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 FANCD2Q9BXW9 1451 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 NLRP1Q9C000 1473 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TMED7-TICAM2A0A0A6YYA0 188 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TRAV8-3A0A0A6YYJ7 113 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 IGHV6-1A0A0B4J1U7 121 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 IGHV2-26A0A0B4J1V2 119 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TRAV26-2A0A0B4J265 109 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 IGHV5-10-1A0A0J9YXX1 117 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 A0A1B0GXF2 115 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 C5orf63A6NC05 138 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 H3BP45 60 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 DHRS3O75911 302 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 SNAPC5O75971 98 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 OR2A4O95047 310 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 NDUFC2O95298 119 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 IGHG2P01859 326 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 IGHMP01871 453 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 MAS1P04201 325 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ATP5G1P05496 136 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 HLA-DQB2P05538 268 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 OR4A8P0C604 315 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 NTF3P20783 257 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 CSRP1P21291 193 aaKnown RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 POLR2IP36954 125 aaKnown RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 CXCL12P48061 93 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 S100A10P60903 97 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 GRB2P62993 217 aaKnown RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF846Q147U1 533 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM241Q24JQ0 296 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF404Q494X3 552 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 IBA57Q5T440 356 aaKnown RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 DNAJC24Q6P3W2 148 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 RASL11AQ6T310 242 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 LINC00299Q6ZSB3 139 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 GTF2H5Q6ZYL4 71 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF695Q8IW36 515 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TCTE3Q8IZS6 198 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 SLC25A45Q8N413 288 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 DRAM1Q8N682 238 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 KRTCAP2Q8N6L1 136 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF615Q8N8J6 731 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM229BQ8NBD8 167 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 OR51A4Q8NGJ6 313 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM106AQ96A25 262 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 NEURL3Q96EH8 262 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 SPACA5Q96QH8 159 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 OR2A7Q96R45 310 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 PRADC1Q9BSG0 188 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF471Q9BX82 626 aaPredicted RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF355PQ9NSJ1 428 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 OR5AC2Q9NZP5 309 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 NAT8Q9UHE5 227 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TECPR2O15040 1411 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 PTPRKQ15262 1439 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 PRG4Q92954 1404 aaPredicted RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 TRAPPC8Q9Y2L5 1435 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 FRMPD1Q5SYB0 1578 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ABCA3Q99758 1704 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ROBO3Q96MS0 1386 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms