RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 ZNF846Q147U1 533 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 KCTD7Q96MP8 289 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 DKKL1Q9UK85 242 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 FUT9Q9Y231 359 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 TMEM212A6NML5 194 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 C19orf84I3L1E1 186 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 I3L521 148 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 NDUFS6O75380 124 aaKnown RBP0.35□□□□□ -2.35
LINC01239-201ENST00000433645 YEATS4O95619 227 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 CLPSP04118 112 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 UBE2IP63279 158 aaKnown RBP0.35□□□□□ -2.35
LINC01239-201ENST00000433645 IBA57Q5T440 356 aaKnown RBP0.35□□□□□ -2.35
LINC01239-201ENST00000433645 SYPL2Q5VXT5 272 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 ZNF826PQ6ZT77 177 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 SLC51BQ86UW2 128 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 TMEM251Q8N6I4 163 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 TMEM161BQ8NDZ6 487 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 ERMAPQ96PL5 475 aaPredicted RBP0.35□□□□□ -2.35
LINC01239-201ENST00000433645 CXorf21Q9HAI6 301 aa0.35□□□□□ -2.35
LINC01239-201ENST00000433645 ZFC3H1O60293 1989 aaKnown RBP0.35□□□□□ -2.35
LINC01239-201ENST00000433645 TNRC6AQ8NDV7 1962 aaKnown RBP0.35□□□□□ -2.35
LINC01239-201ENST00000433645 EML6Q6ZMW3 1958 aa0.34□□□□□ -2.35
LINC01239-201ENST00000433645 C1orf232A0A0U1RR37 186 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 FAM25EA8MYX2 175 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 ADGRB2O60241 1585 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 FABP9Q0Z7S8 132 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 STX5Q13190 355 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 RALGAPA2Q2PPJ7 1873 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 HIST2H3AQ71DI3 136 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 ZNF550Q7Z398 422 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 DEFB128Q7Z7B8 93 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 C1orf158Q8N1D5 194 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 NDEL1Q9GZM8 345 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 PXMP4Q9Y6I8 212 aa0.34□□□□□ -2.36
LINC01239-201ENST00000433645 DCCP43146 1447 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 TRBV6-7A0A0A0MS04 114 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 FABP12A6NFH5 140 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 GGT3PA6NGU5 568 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 FABP5P3A8MUU1 101 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 F5H768 121 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 SSNA1O43805 119 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 C8orf88P0DMB2 117 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 KCNE1P15382 129 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 MED21Q13503 144 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 CST9Q5W186 159 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 GLT8D1Q68CQ7 371 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 AAED1Q7RTV5 226 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 FUNDC1Q8IVP5 155 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 OR4D11Q8NGI4 311 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 PAQR5Q9NXK6 330 aaPredicted RBP0.33□□□□□ -2.36
LINC01239-201ENST00000433645 IL36BQ9NZH7 164 aa0.33□□□□□ -2.36
LINC01239-201ENST00000433645 ABCC11Q96J66 1382 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 EML5Q05BV3 1969 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 COCHO43405 550 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 OR5F1O95221 314 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 MYL12AP19105 171 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 RPS4Y1P22090 263 aaKnown RBP0.32□□□□□ -2.36
LINC01239-201ENST00000433645 SUPT4H1P63272 117 aaKnown RBP0.32□□□□□ -2.36
LINC01239-201ENST00000433645 CCL20P78556 96 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 PPP1R1AQ13522 171 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 PLEKHG7Q6ZR37 379 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 DNAJB3Q8WWF6 145 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 PLEKHJ1Q9NW61 149 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 CNTRLQ7Z7A1 2325 aa0.32□□□□□ -2.36
LINC01239-201ENST00000433645 M0R2N4 97 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 CALUO43852 315 aaPredicted RBP0.31□□□□□ -2.36
LINC01239-201ENST00000433645 PRM2P04554 102 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 FAM228BP0C875 321 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 LINC00471Q8N535 108 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 DEFB125Q8N687 156 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 RASSF5Q8WWW0 418 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 TMEM106AQ96A25 262 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 OBSCN-AS1Q96MR7 158 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 C7orf50Q9BRJ6 194 aaKnown RBP0.31□□□□□ -2.36
LINC01239-201ENST00000433645 IMP3Q9NV31 184 aaKnown RBP0.31□□□□□ -2.36
LINC01239-201ENST00000433645 CKLFQ9UBR5 152 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 TTC21AQ8NDW8 1320 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 CCDC88AQ3V6T2 1871 aa0.31□□□□□ -2.36
LINC01239-201ENST00000433645 HYPMO75409 117 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 REG1AP05451 166 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 HTR1AP08908 422 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 UCHL3P15374 230 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 BRS3P32247 399 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 MARCKSL1P49006 195 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 IFITM2Q01629 132 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 PDE6HQ13956 83 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 LCN15Q6UWW0 184 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 PHF13Q86YI8 300 aaPredicted RBP0.3□□□□□ -2.36
LINC01239-201ENST00000433645 ZNF418Q8TF45 676 aaPredicted RBP0.3□□□□□ -2.36
LINC01239-201ENST00000433645 CMTM5Q96DZ9 223 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 MAP1LC3AQ9H492 121 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 EFCAB1Q9HAE3 211 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 C15orf41Q9Y2V0 281 aa0.3□□□□□ -2.36
LINC01239-201ENST00000433645 A0A1B0GV50 99 aa0.29□□□□□ -2.36
LINC01239-201ENST00000433645 GOLGA8KD6RF30 607 aa0.29□□□□□ -2.36
LINC01239-201ENST00000433645 MAP3K7CLP57077 242 aa0.29□□□□□ -2.36
LINC01239-201ENST00000433645 SPANXN5Q5MJ07 72 aa0.29□□□□□ -2.36
LINC01239-201ENST00000433645 WFDC11Q8NEX6 87 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms