RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 SNURFLB1AK76 121 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 ISLRO14498 428 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 TIMM8AO60220 97 aaPredicted RBP12.2□□□□□ -0.46
DDX56-205ENST00000433257 HSPE1P61604 102 aaKnown RBP12.2□□□□□ -0.46
DDX56-205ENST00000433257 CX3CL1P78423 397 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 Q6ZT83 130 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 Q6ZWC4 215 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 TMEM140Q9NV12 185 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
DDX56-205ENST00000433257 MGAQ8IWI9 3026 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 C20orf202A1L168 122 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 HELTA6NFD8 242 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 M0R1X1 148 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 SFTPCP11686 197 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 EGR1P18146 543 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 CFHR2P36980 270 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 CEBPDP49716 269 aaPredicted RBP12.19□□□□□ -0.46
DDX56-205ENST00000433257 POU2AF1Q16633 256 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 FAM162BQ5T6X4 162 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 MBNL2Q5VZF2 373 aaKnown RBP12.19□□□□□ -0.46
DDX56-205ENST00000433257 STPG3Q8N7X2 389 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 COMMD5Q9GZQ3 224 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 ZNF257Q9Y2Q1 563 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
DDX56-205ENST00000433257 CACNA1BQ00975 2339 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 PKD1L2Q7Z442 2459 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 RRHO14718 337 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 ZNHIT1O43257 154 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 IGKV3-15P01624 115 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 AMY1AP04745 511 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 GPX1P07203 203 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 IGHV1-2P23083 117 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 CBLN1P23435 193 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 SSTR5P35346 364 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 SUMO1P63165 101 aaKnown RBP12.19□□□□□ -0.46
DDX56-205ENST00000433257 PRR20EP86478 221 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 PRR20CP86479 221 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 PRR20DP86480 221 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 PRR20BP86481 221 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 PRR20AP86496 221 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 GCSAMLQ5JQS6 135 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 TCF23Q7RTU1 214 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 LRP11Q86VZ4 500 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 FDCSPQ8NFU4 85 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 NEUROG1Q92886 237 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 MRPL32Q9BYC8 188 aaKnown RBP12.19□□□□□ -0.46
DDX56-205ENST00000433257 HES7Q9BYE0 225 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 MRPL27Q9P0M9 148 aaKnown RBP12.19□□□□□ -0.46
DDX56-205ENST00000433257 UQCR10Q9UDW1 63 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 V9GYV3 84 aa12.19□□□□□ -0.46
DDX56-205ENST00000433257 EPG5Q9HCE0 2579 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 ZNF253O75346 499 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 FAM87AP0C7U9 286 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 PRDX2P32119 198 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 IER3P46695 156 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 PMCHL1Q16048 86 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 SPINK9Q5DT21 86 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 ABHD17AQ96GS6 310 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 TMEM208Q9BTX3 173 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 TP53TG3Q9ULZ0 132 aa12.18□□□□□ -0.46
DDX56-205ENST00000433257 GRIFINA4D1Z8 144 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 NUPR1O60356 82 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 G0S2P27469 103 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 MPV17P39210 176 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 RPS16P62249 146 aaKnown RBP12.17□□□□□ -0.46
DDX56-205ENST00000433257 PRSS8Q16651 343 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 CYB5R2Q6BCY4 276 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 LINC00696Q6ZRV3 163 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 OR4P4Q8NGL7 312 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 DDB2Q92466 427 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 RBM14Q96PK6 669 aaKnown RBP12.17□□□□□ -0.46
DDX56-205ENST00000433257 TMEM14BQ9NUH8 114 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 AURKAIP1Q9NWT8 199 aaPredicted RBP12.17□□□□□ -0.46
DDX56-205ENST00000433257 PCSK5Q92824 1860 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 FREM1Q5H8C1 2179 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 DOCK10Q96BY6 2186 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 MED12LQ86YW9 2145 aa12.17□□□□□ -0.46
DDX56-205ENST00000433257 IGHV3-43A0A0B4J1X8 118 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 PGPEP1LA6NFU8 196 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 K7EN84 100 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 WNT9BO14905 357 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 CEACAM4O75871 244 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 CELA3BP08861 270 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 IGHV3-43DP0DP04 118 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 FAM214BQ7L5A3 538 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 VN1R17PQ8TDU5 208 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 WIPF2Q8TF74 440 aaPredicted RBP12.16□□□□□ -0.46
DDX56-205ENST00000433257 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 PLEKHA3Q9HB20 300 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 NAT8BQ9UHF3 227 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 SRRM5B3KS81 715 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 AQP7O14520 342 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 ALKBH6Q3KRA9 238 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms