RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 FAM122AQ96E09 287 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 B4DEV8 164 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 MAS1LP35410 378 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 OR10W1Q8NGF6 305 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 SIRT7Q9NRC8 400 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 URGCP-MRPS24S4R325 110 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 TRBV23-1A0A0A0MS06 115 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 AGAP20933 346 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 DLX1P56177 255 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 PDPNQ86YL7 162 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 OR5B3Q8NH48 314 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 TMEM133Q9H2Q1 129 aa13.17□□□□□ -0.3
MBD4-203ENST00000429544 A0A087X0M5 115 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 A0A1B0GX30 115 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 B2MP61769 119 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 OR4C13Q8NGP0 309 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 Q8WTZ3 238 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 RAB1CQ92928 201 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 KCNIP2Q9NS61 270 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
MBD4-203ENST00000429544 WASHC3Q9Y3C0 194 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 TMEM250H0YL14 139 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 IGHV2-70P01814 119 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 C1QTNF9P0C862 333 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 IGFBP2P18065 325 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 UBE2G2P60604 165 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 RPL8P62917 257 aaKnown RBP13.16□□□□□ -0.3
MBD4-203ENST00000429544 PRB3Q04118 309 aaPredicted RBP13.16□□□□□ -0.3
MBD4-203ENST00000429544 MOB3BQ86TA1 216 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 STPG3Q8N7X2 389 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 MALSU1Q96EH3 234 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 COMMD5Q9GZQ3 224 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 PARLQ9H300 379 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 ABCA4P78363 2273 aa13.16□□□□□ -0.3
MBD4-203ENST00000429544 AKR1D1P51857 326 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 ZNF137PP52743 207 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 ELOBQ15370 118 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 NAT8Q9UHE5 227 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 COL6A6A6NMZ7 2263 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 TPRP12270 2363 aaKnown RBP13.15□□□□□ -0.3
MBD4-203ENST00000429544 RELNP78509 3460 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 CXCL1P09341 107 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 ARL14EPLP0DKL9 152 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 RNASE2P10153 161 aaKnown RBP13.15□□□□□ -0.3
MBD4-203ENST00000429544 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.3
MBD4-203ENST00000429544 ADIRFQ15847 76 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 C2orf83Q53S99 150 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 ZNF841Q6ZN19 808 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 CYP2G1PQ6ZSU1 146 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 NEIL1Q96FI4 390 aaPredicted RBP13.15□□□□□ -0.3
MBD4-203ENST00000429544 TMEM204Q9BSN7 226 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 NDUFA4L2Q9NRX3 87 aa13.15□□□□□ -0.3
MBD4-203ENST00000429544 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
MBD4-203ENST00000429544 PPOXP50336 477 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 RAB31Q13636 194 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 LY6DQ14210 128 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 ABHD5Q8WTS1 349 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 PRELID1Q9Y255 219 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 KLF2Q9Y5W3 355 aaPredicted RBP13.14□□□□□ -0.31
MBD4-203ENST00000429544 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 CXorf65A6NEN9 183 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 FNDC10F2Z333 226 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 LY6HO94772 140 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 IGLV2-23P01705 113 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 IL3RAP26951 378 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 RPS10P46783 165 aaKnown RBP13.14□□□□□ -0.31
MBD4-203ENST00000429544 TMEM241Q24JQ0 296 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
MBD4-203ENST00000429544 LRBAP50851 2863 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 TGIF2-C20orf24A0A0A6YYL0 155 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 E7EUB6 86 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 STAG3L2P0CL84 134 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 STAG3L3P0CL85 134 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 ATP5G3P48201 142 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 SNRPEP62304 92 aaKnown RBP13.13□□□□□ -0.31
MBD4-203ENST00000429544 TMEM249Q2WGJ8 235 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 C10orf55Q5SWW7 151 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 SPATA31B1PQ5VZV4 182 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 IGHV2-26A0A0B4J1V2 119 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 ENSAO43768 121 aaKnown RBP13.13□□□□□ -0.31
MBD4-203ENST00000429544 RPL29P47914 159 aaKnown RBP13.13□□□□□ -0.31
MBD4-203ENST00000429544 SPNS3Q6ZMD2 512 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 OR4A5Q8NH83 315 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 RITA1Q96K30 269 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 SSX3Q99909 188 aa13.13□□□□□ -0.31
MBD4-203ENST00000429544 ZNF430Q9H8G1 570 aaPredicted RBP13.13□□□□□ -0.31
MBD4-203ENST00000429544 SLC25A17O43808 307 aa13.12□□□□□ -0.31
MBD4-203ENST00000429544 CXorf1O96002 111 aa13.12□□□□□ -0.31
MBD4-203ENST00000429544 S100A6P06703 90 aa13.12□□□□□ -0.31
MBD4-203ENST00000429544 MLANAQ16655 118 aa13.12□□□□□ -0.31
MBD4-203ENST00000429544 TPSG1Q9NRR2 321 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms