RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CRYGCP07315 174 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 TRAPPC2P0DI81 140 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 TRAPPC2BP0DI82 140 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 ZNF616Q08AN1 781 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 HSD17B13Q7Z5P4 300 aaPredicted RBP19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 FAM223AQ8IWN6 122 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 OR1N2Q8NGR9 330 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 OR4A16Q8NH70 328 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 S100ZQ8WXG8 99 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 GALNT14Q96FL9 552 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 C7orf50Q9BRJ6 194 aaKnown RBP19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 ALX4Q9H161 411 aaPredicted RBP19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 NDUFA4L2Q9NRX3 87 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 KCNIP3Q9Y2W7 256 aa19.47■□□□□ 0.71
HERPUD2-205ENST00000427455 TRBV9A0A0B4J1U6 114 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 P0C879 139 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 AKR1C4P17516 323 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 CTRB1P17538 263 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 RHOGP84095 191 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 DEFA5Q01523 94 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 RBMS2Q15434 407 aaKnown RBP19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 CTRB2Q6GPI1 263 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 RBPMSQ93062 196 aaKnown RBP19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 RCC1LQ96I51 464 aaKnown RBP19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 CCDC32Q9BV29 185 aa19.46■□□□□ 0.71
HERPUD2-205ENST00000427455 MEGF8Q7Z7M0 2845 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 DBX1A6NMT0 343 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 CENPXA8MT69 81 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 OR8U8P0C7N1 319 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 RAB25P57735 213 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 C19orf35Q6ZS72 473 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 TMED4Q7Z7H5 227 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 NECAP1Q8NC96 275 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 RNASE11Q8TAA1 199 aaKnown RBP19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 DPF1Q92782 380 aa19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 LSM10Q969L4 123 aaKnown RBP19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 RRNAD1Q96FB5 475 aaKnown RBP19.45■□□□□ 0.7
HERPUD2-205ENST00000427455 LINC00854A0A1B0GVQ3 168 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 RBMXL2O75526 392 aaKnown RBP19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 REG1AP05451 166 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 SAMD5Q5TGI4 173 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 OR10W1Q8NGF6 305 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 LHFPL5Q8TAF8 219 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 TMEM56Q96MV1 263 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 HINT2Q9BX68 163 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 TMEM56-RWDD3S4R434 201 aa19.44■□□□□ 0.7
HERPUD2-205ENST00000427455 G3V4G9 280 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 DUS4LO95620 317 aaKnown RBP19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 ANXA3P12429 323 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 DEFA4P12838 97 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 CCR6P51684 374 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 SUPT4H1P63272 117 aaKnown RBP19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 TMEM187Q14656 261 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 IZUMO4Q1ZYL8 232 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 TMEM268Q5VZI3 342 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 ZNF429Q86V71 674 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 FAM219AQ8IW50 185 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 SELENOHQ8IZQ5 122 aaKnown RBP19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 IL22RA2Q969J5 263 aa19.43■□□□□ 0.7
HERPUD2-205ENST00000427455 IGHV4OR15-8A0A075B7B6 117 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 A0A087WW49 117 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 LINC01619G3V211 115 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 OR2J3O76001 311 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 HSPB1P04792 205 aaKnown RBP19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 OR13C7P0DN81 318 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 IGLL1P15814 213 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 HIST1H1BP16401 226 aaKnown RBP19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 WT1-ASQ06250 92 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 KLK9Q2XQG4 91 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 TMEM128Q5BJH2 165 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 FANCD2OSQ96PS1 177 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 KLK9Q9UKQ9 250 aa19.42■□□□□ 0.7
HERPUD2-205ENST00000427455 A0A0B4J293 547 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 A0A0G2JRQ6 117 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 NDUFB6O95139 128 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 SRPXP78539 464 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 ATP5G2Q06055 141 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 OXLD1Q5BKU9 147 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 ZNF343Q6P1L6 599 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 CENPSQ8N2Z9 138 aa19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 MCRIP2Q9BUT9 160 aaKnown RBP19.41■□□□□ 0.7
HERPUD2-205ENST00000427455 IGLV11-55A0A075B6I3 123 aa19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 BTCP35070 178 aa19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 MECP2P51608 486 aaKnown RBP19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 HSPE1P61604 102 aaKnown RBP19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 PRCDQ00LT1 54 aa19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 EXOSC2Q13868 293 aaKnown RBP19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 C15orf32Q32M92 178 aa19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 C1QL4Q86Z23 238 aa19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 GPR61Q9BZJ8 451 aa19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 WDR12Q9GZL7 423 aaKnown RBP19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 RANGRFQ9HD47 186 aaPredicted RBP19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 FBXL7Q9UJT9 491 aa19.4■□□□□ 0.7
HERPUD2-205ENST00000427455 CYB5BO43169 146 aa19.39■□□□□ 0.69
HERPUD2-205ENST00000427455 PRR13Q9NZ81 148 aa19.39■□□□□ 0.69
HERPUD2-205ENST00000427455 PIGBOS1A0A0B4J2F0 54 aa19.38■□□□□ 0.69
HERPUD2-205ENST00000427455 ANKRD34BA5PLL1 514 aa19.38■□□□□ 0.69
HERPUD2-205ENST00000427455 VAMP1P23763 118 aa19.38■□□□□ 0.69
HERPUD2-205ENST00000427455 UBE2MP61081 183 aaKnown RBP19.38■□□□□ 0.69
HERPUD2-205ENST00000427455 SLC35G3Q8N808 338 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms