RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 SPNS3Q6ZMD2 512 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 STPG3Q8N7X2 389 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 HARBI1Q96MB7 349 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 TXNDC17Q9BRA2 123 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 MSRB2Q9Y3D2 182 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 CD3EP07766 207 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 LOXP28300 417 aaPredicted RBP15.68■□□□□ 0.1
SNX17-202ENST00000427123 TMEM177Q53S58 311 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 OR10X1Q8NGY0 326 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 COL25A1Q9BXS0 654 aaPredicted RBP15.68■□□□□ 0.1
SNX17-202ENST00000427123 LAMA5O15230 3695 aa15.68■□□□□ 0.1
SNX17-202ENST00000427123 B9A039 149 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 CASP6P55212 293 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 UBE2G2P60604 165 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 RHOBP62745 196 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 C2orf83Q53S99 150 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 CST9LP1Q5W188 147 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 TMEM186Q96B77 213 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 IGHV1-69-2A0A0G2JMI3 117 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 PCP4L1A6NKN8 68 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 S100A9P06702 114 aaKnown RBP15.67■□□□□ 0.1
SNX17-202ENST00000427123 ATP5G3P48201 142 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 DLX6P56179 175 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 PDPNQ86YL7 162 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 NANPQ8TBE9 248 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 ABHD5Q8WTS1 349 aa15.67■□□□□ 0.1
SNX17-202ENST00000427123 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.66■□□□□ 0.1
SNX17-202ENST00000427123 H7BYZ3 331 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 NPPCP23582 126 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 PRR20EP86478 221 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 PRR20CP86479 221 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 PRR20DP86480 221 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 PRR20BP86481 221 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 PRR20AP86496 221 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 TMEM155Q4W5P6 130 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 OR1L8Q8NGR8 309 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 FLYWCH2Q96CP2 140 aaKnown RBP15.66■□□□□ 0.1
SNX17-202ENST00000427123 ANAPC16Q96DE5 110 aa15.66■□□□□ 0.1
SNX17-202ENST00000427123 A0A087X0M5 115 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 A0A1B0GX30 115 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 TRGC2P03986 189 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 IGFBP2P18065 325 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 GNB1P62873 340 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 OR4A5Q8NH83 315 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 HOXA5P20719 270 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 USF1P22415 310 aaPredicted RBP15.65■□□□□ 0.1
SNX17-202ENST00000427123 S100PP25815 95 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 ZNF137PP52743 207 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 UCNP55089 124 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 TMEM144Q7Z5S9 345 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 OR4C13Q8NGP0 309 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 OR5B12Q96R08 314 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 NABP2Q9BQ15 211 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 COMMD5Q9GZQ3 224 aa15.65■□□□□ 0.1
SNX17-202ENST00000427123 HIST1H2BKO60814 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BJP06899 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 RNASE2P10153 161 aaKnown RBP15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BOP23527 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 CHRNB4P30926 498 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BBP33778 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 REG1BP48304 166 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BDP58876 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BCP62807 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 RPL8P62917 257 aaKnown RBP15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST2H2BEQ16778 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.64■□□□□ 0.09
SNX17-202ENST00000427123 OR51G1Q8NGK1 321 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 VSTM2AQ8TAG5 236 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BHQ93079 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 ST6GALNAC6Q969X2 333 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BNQ99877 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 HIST1H2BMQ99879 126 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 DOK5Q9P104 306 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 NBEAQ8NFP9 2946 aa15.64■□□□□ 0.09
SNX17-202ENST00000427123 INS-IGF2F8WCM5 200 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 CLN5O75503 358 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 PFN1P07737 140 aaKnown RBP15.63■□□□□ 0.09
SNX17-202ENST00000427123 GCHFRP30047 84 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 CA7P43166 264 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 GALR1P47211 349 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 NDUFA6P56556 154 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 FBXL19-AS1Q494R0 122 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 OR9G1Q8NH87 305 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 TMEM167AQ8TBQ9 72 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 PYGO2Q9BRQ0 406 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 PCGF1Q9BSM1 259 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 NDUFA4L2Q9NRX3 87 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 SLC45A2Q9UMX9 530 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 WASHC3Q9Y3C0 194 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 TRBV23-1A0A0A0MS06 115 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 MT-CO2P00403 227 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 SLC35E1Q96K37 410 aa15.63■□□□□ 0.09
SNX17-202ENST00000427123 SEPSECSQ9HD40 501 aaKnown RBP15.63■□□□□ 0.09
SNX17-202ENST00000427123 LINC00869P0C866 280 aa15.62■□□□□ 0.09
SNX17-202ENST00000427123 ATMQ13315 3056 aa15.62■□□□□ 0.09
SNX17-202ENST00000427123 A0A1W2PN81 502 aa15.61■□□□□ 0.09
SNX17-202ENST00000427123 FAM90A27PA6NNH2 459 aa15.61■□□□□ 0.09
SNX17-202ENST00000427123 NDUFB4O95168 129 aa15.61■□□□□ 0.09
SNX17-202ENST00000427123 IGHV1-8P0DP01 117 aa15.61■□□□□ 0.09
SNX17-202ENST00000427123 IL3RAP26951 378 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms