RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 ATP5G2Q06055 141 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 PDLIM3Q53GG5 364 aaPredicted RBP13.89□□□□□ -0.19
HERC3-205ENST00000426683 C9orf66Q5T8R8 295 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 ZNF343Q6P1L6 599 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 H2BFWTQ7Z2G1 175 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 NECAP1Q8NC96 275 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 OR1L8Q8NGR8 309 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 SRSF8Q9BRL6 282 aaKnown RBP13.89□□□□□ -0.19
HERC3-205ENST00000426683 SRRQ9GZT4 340 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 PRNDQ9UKY0 176 aa13.89□□□□□ -0.19
HERC3-205ENST00000426683 NOTCH1P46531 2555 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 OVOL1O14753 267 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 DHFRP00374 187 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 DEFA4P12838 97 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 FAUP35544 74 aaKnown RBP13.88□□□□□ -0.19
HERC3-205ENST00000426683 EXOSC2Q13868 293 aaKnown RBP13.88□□□□□ -0.19
HERC3-205ENST00000426683 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 THOC7Q6I9Y2 204 aaKnown RBP13.88□□□□□ -0.19
HERC3-205ENST00000426683 GDPD1Q8N9F7 314 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 OR10W1Q8NGF6 305 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 FANCD2OSQ96PS1 177 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 HINT2Q9BX68 163 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 NDUFA4L2Q9NRX3 87 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 AURKAIP1Q9NWT8 199 aaPredicted RBP13.88□□□□□ -0.19
HERC3-205ENST00000426683 FKBP11Q9NYL4 201 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 PEF1Q9UBV8 284 aaKnown RBP13.88□□□□□ -0.19
HERC3-205ENST00000426683 FBXL7Q9UJT9 491 aa13.88□□□□□ -0.19
HERC3-205ENST00000426683 TEX13DA0A0J9YY54 714 aaPredicted RBP13.87□□□□□ -0.19
HERC3-205ENST00000426683 DBX1A6NMT0 343 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 C15orf61A6NNL5 157 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 B3GALNT1O75752 331 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 TRBV12-3P01733 135 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 UCP1P25874 307 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 KRTAP10-11P60412 298 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 EGFEM1PQ0D2K5 195 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 C15orf32Q32M92 178 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 REC114Q7Z4M0 266 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 OR4A16Q8NH70 328 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 SCGB3A2Q96PL1 93 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 NAA60Q9H7X0 242 aa13.87□□□□□ -0.19
HERC3-205ENST00000426683 ATG12O94817 140 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 NDUFB8O95169 186 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 IGKV1-5P01602 117 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 OR5AC1P0C628 307 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 HIST1H1BP16401 226 aaKnown RBP13.86□□□□□ -0.19
HERC3-205ENST00000426683 ZP3P21754 424 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 AKR1C2P52895 323 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 HSD17B13Q7Z5P4 300 aaPredicted RBP13.86□□□□□ -0.19
HERC3-205ENST00000426683 OR5B3Q8NH48 314 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 LSM10Q969L4 123 aaKnown RBP13.86□□□□□ -0.19
HERC3-205ENST00000426683 TMEM14BQ9NUH8 114 aa13.86□□□□□ -0.19
HERC3-205ENST00000426683 IGLV11-55A0A075B6I3 123 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 CRYM-AS1A6NIL9 109 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 OR13C7P0DN81 318 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 WT1-ASQ06250 92 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 IZUMO4Q1ZYL8 232 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 KLK9Q2XQG4 91 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 ZNF57Q68EA5 555 aaPredicted RBP13.85□□□□□ -0.19
HERC3-205ENST00000426683 TMEM56Q96MV1 263 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 KLK9Q9UKQ9 250 aa13.85□□□□□ -0.19
HERC3-205ENST00000426683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.84□□□□□ -0.19
HERC3-205ENST00000426683 MECP2P51608 486 aaKnown RBP13.84□□□□□ -0.19
HERC3-205ENST00000426683 DHODHQ02127 395 aa13.84□□□□□ -0.19
HERC3-205ENST00000426683 BAK1Q16611 211 aa13.84□□□□□ -0.19
HERC3-205ENST00000426683 SGPP2Q8IWX5 399 aa13.84□□□□□ -0.19
HERC3-205ENST00000426683 GLYATL2Q8WU03 294 aa13.84□□□□□ -0.19
HERC3-205ENST00000426683 DEDD2Q8WXF8 326 aa13.84□□□□□ -0.19
HERC3-205ENST00000426683 TMEM230Q96A57 120 aa13.84□□□□□ -0.19
HERC3-205ENST00000426683 S4R3C0 116 aa13.84□□□□□ -0.19
HERC3-205ENST00000426683 DNAH3Q8TD57 4116 aa13.83□□□□□ -0.19
HERC3-205ENST00000426683 SAP30O75446 220 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 CDS2O95674 445 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 IGHV3-23P01764 117 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 P0C879 139 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 INPP1P49441 399 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 INSL3P51460 131 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 TRIQKQ629K1 86 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 RNASE11Q8TAA1 199 aaKnown RBP13.83□□□□□ -0.2
HERC3-205ENST00000426683 RRNAD1Q96FB5 475 aaKnown RBP13.83□□□□□ -0.2
HERC3-205ENST00000426683 ZMAT5Q9UDW3 170 aaKnown RBP13.83□□□□□ -0.2
HERC3-205ENST00000426683 DMRT1Q9Y5R6 373 aa13.83□□□□□ -0.2
HERC3-205ENST00000426683 A0A0G2JRQ6 117 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 AKR1C4P17516 323 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 HSPE1P61604 102 aaKnown RBP13.82□□□□□ -0.2
HERC3-205ENST00000426683 KLF5Q13887 457 aaPredicted RBP13.82□□□□□ -0.2
HERC3-205ENST00000426683 RPEL1Q2QD12 228 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 FAM209BQ5JX69 171 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 SLC25A24Q6NUK1 477 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 ACSM6Q6P461 480 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 ZNF429Q86V71 674 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 LHFPL5Q8TAF8 219 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 MRAPQ8TCY5 172 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 EEF1AKMT3Q96AZ1 226 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 SDHCQ99643 169 aaPredicted RBP13.82□□□□□ -0.2
HERC3-205ENST00000426683 THYN1Q9P016 225 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 KCNIP3Q9Y2W7 256 aa13.82□□□□□ -0.2
HERC3-205ENST00000426683 A0A0B4J293 547 aa13.81□□□□□ -0.2
HERC3-205ENST00000426683 PPP5D1E7EU14 171 aa13.81□□□□□ -0.2
HERC3-205ENST00000426683 BMPR1BO00238 502 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms